| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4298 |
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| Symbol | |
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| ID | 5192652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4807264 |
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| End bp | 4808205 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640588775 |
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| Product | glycine cleavage T protein (aminomethyl transferase) |
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| Protein accession | YP_001269606 |
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| Protein GI | 148549504 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
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| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGATT CCGCTTTCTT CTGCCCCCTG TCCCACGAGG GCATCCTCGC CGTCCGCGGC
TCCGATGCAG GCAAGTTCCT GCAAGGCCAG CTGACCTGCA ACATCAACTA CCTCAGCCAG
GAACACGCCA GCCTCGGCGC CCGCTGCATG GTCAAGGGGC GCATGCAGTC GAGCTTCCGC
ATAGTGCCCG AGGGCAACGG CTACTTGCTG GCCATGGCCA GCGAACTGCT CGACGCGCAA
CTGGCCGACC TGAAAAAGTA CGCCGTATTC TCCAAGGCCA CGCTGACCGA CGAAAGCACC
GCATGGGCAC GCTTCGGCCT GCAAGGTGGC GACACCGCGC TGCAGGCGCT GGGGCTTGTC
GTGCCCGCAG CCGCTGGTAG CACCGTGCGC CATGACGGGC TGATCGCGAT CGCCGTGTCC
GCCGGCCGGG TTGAGCTGTG GGTGCCGGCG GCTGACGCCG AGCCTGTACG CCAGGCCCTC
GCCGCAGCGC TGCCCGAAGG CACGCTCAAC GACTGGCTGC TGGGCCAGAT TCGCGCAGGT
ATCGGCCAGG TCATGGGCCC GACCCGTGAA CTGTTCATCC CGCAGATGAT CAACCTGCAG
GCCGTCGACG GCGTCAGTTT CAAGAAAGGC TGCTACACCG GCCAGGAAAT CGTCGCCCGC
ATGCAGTACC TGGGCAAACT CAAGCGCCGC CAGTACCGCC TGGCTCTGGA CCAGCAGGCC
ATTCCGGCCC CGGGCGCCGA GATCTTCTCG CCCACCCATG GGTCGTCGGT CGGTGAAGTG
GTCATTGCTG CCGGCAACGG CGCCGGCTGC GAACTGCTCG CAGTGCTGAG CGCCGAGGCG
GTGGAAGACG GCAACCTGCA CCTGGGCAGC CTCGAAGGCC CGCGCCTGCA GGTGCTGACC
CTGCCTTACG AACTGGACCG CGACCGGGAA ATCCAGCGCT GA
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| Protein sequence | MADSAFFCPL SHEGILAVRG SDAGKFLQGQ LTCNINYLSQ EHASLGARCM VKGRMQSSFR
IVPEGNGYLL AMASELLDAQ LADLKKYAVF SKATLTDEST AWARFGLQGG DTALQALGLV
VPAAAGSTVR HDGLIAIAVS AGRVELWVPA ADAEPVRQAL AAALPEGTLN DWLLGQIRAG
IGQVMGPTRE LFIPQMINLQ AVDGVSFKKG CYTGQEIVAR MQYLGKLKRR QYRLALDQQA
IPAPGAEIFS PTHGSSVGEV VIAAGNGAGC ELLAVLSAEA VEDGNLHLGS LEGPRLQVLT
LPYELDRDRE IQR
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