| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4292 |
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| Symbol | |
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| ID | 5191319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4802092 |
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| End bp | 4803057 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640588769 |
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| Product | sigma E regulatory protein, MucB/RseB |
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| Protein accession | YP_001269600 |
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| Protein GI | 148549498 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3026] Negative regulator of sigma E activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.700398 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCGC TACCTCTCCT GTCGCTGCTG ATTGGCAGCT GCATGACGGT GCCAGCATTG
GCGGCCAATT CTTCGCCTGA GGCGAGTGAA TGGCTGAACA AGCTGGCACA GGCCGAGCAA
AAACAGAGCT ATCAAGGGTC GTTCGTCTAC GAACGCAACG GCAGTTTCTC CTCCCACGAC
ATCTGGCACA GGGTCGACGA CGGCAAGGTC AGCGAGCGGC TGTTGCAGCT TGATGGCGCC
GCCCAGGAGA TCGTGCGCGT AGATGGCAAG GTGCAGTGCG TCAGCGGGGC CTTGGCCAGC
GGTGTCACGG TGCCGCCGGA TACCGCACCG CGTGTGCTTG ATCCGCTGAA ACTGATGGGC
TGGTACGATT TGAGTGTTGC AGGCAAGTCA CGGGTCGCCG GGCGCGATGC CGTGATCATT
GCGCTCACGC CACGCGACCA GCATCGCTAT GCATTCGAAT TGCATCTGGA CCGTCACTCG
GGTTTGCCGC TGCGTTCGTT GATGCTCAAC GACAAGGGGC AGTTGCTGGA ACGCTTCCAG
ATGACCCGTC TCGATACCGA TGATGTCCCC AGCGACGCTG ACCTGCGCCC AGGTGCTGGC
TGCAAGCCGG TGCAGCATGT GGCTGCCGGC AGCAATGATA CCGTCGCGGG TTGGCGTTCG
GACTGGTTGC CACCCGGTTT CGAGCTGGTC AACAGCTCGG TACGCCGCGA TCCCAAGCGC
AACAGTTCGG TCAGCAGCTT GATGTATGAC GACGGCCTGG CGCGTTTTTC GGTGTTCATC
GAGCAAGTGA GCGATGATGG CGGCACCGAC ATGCGCACCC AGTTAGGCCC GACCTCGGCA
GTCTCGCGTC GCCTGAATAC ACCCAAGGGC AAGGTGATGG TGACCGTGGT TGGCGAAATT
CCGCTGGGTA CGGCAGAGCG CGTTGCCCTG TCGATGCGCC CCCAGGATGC CCAGGCGCGC
CAGTAA
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| Protein sequence | MRALPLLSLL IGSCMTVPAL AANSSPEASE WLNKLAQAEQ KQSYQGSFVY ERNGSFSSHD
IWHRVDDGKV SERLLQLDGA AQEIVRVDGK VQCVSGALAS GVTVPPDTAP RVLDPLKLMG
WYDLSVAGKS RVAGRDAVII ALTPRDQHRY AFELHLDRHS GLPLRSLMLN DKGQLLERFQ
MTRLDTDDVP SDADLRPGAG CKPVQHVAAG SNDTVAGWRS DWLPPGFELV NSSVRRDPKR
NSSVSSLMYD DGLARFSVFI EQVSDDGGTD MRTQLGPTSA VSRRLNTPKG KVMVTVVGEI
PLGTAERVAL SMRPQDAQAR Q
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