| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4291 |
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| Symbol | |
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| ID | 5191318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4800483 |
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| End bp | 4801916 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640588768 |
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| Product | protease Do |
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| Protein accession | YP_001269599 |
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| Protein GI | 148549497 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAATAC CACGCTTGAA ATCCTACCTA ATGATGTTCG CTGCTGTGCT GATGCTCGGC
CAAGTCCTCA CCGCCCAGGC CGAGGAAGCC CTGCCGGACT TCACCACCTT GGTGGAGCAG
GCTTCGCCGG CGGTGGTCAA CATCAGTACC AAGCAGAAGC TGCCTGACCG CCGAATCGCC
GCAGGCCAGA TGCCGGACCT GGAAGGCCTG CCGCCGATGT TCCGCGAGTT CTTCGAGCGC
AACATGCCCC AGCAGCCGCG CTCGCCGCGC GGCGACCGCC AGCGCGAGGC GCAGTCGCTG
GGCTCGGGTT TCATCATCTC CAGTGATGGC TACGTGCTCA CCAATAACCA TGTGGTGGCC
GATGCCGACG AGATCATCGT CCGCCTGTCG GACCGTAGCG AGCTGCAGGC CAAGCTGGTG
GGTACCGACC CGCGTACTGA CGTGGCGCTG CTGAAGGTCG ATGGCAAGAA TTTGCCAACG
GTGAAACTGG GTGACTCCGA GAAGCTCAAG GTGGGCGAGT GGGTACTGGC CATCGGTTCG
CCGTTCGGCT TCGACCATTC GGTGACCAAA GGTATCGTCA GCGCCAAGGG CCGGACCCTG
CCCAATGACA CCTACGTACC GTTCATCCAG ACCGACGTGG CCATCAACCC GGGTAACTCC
GGCGGCCCCC TGTTCAACAT GAAAGGCGAA GTGGTGGGTA TCAACTCGCA GATCTTCACC
CGTTCTGGCG GTTTCATGGG GCTGTCGTTC GCCATCCCGA TTGACGTGGC GATTGATGTC
TCCAACCAGC TGAAGAAAGA CGGCAAGGTC AGCCGCGGCT GGCTGGGCGT AGTGATTCAG
GAGGTCAACA AGGACCTGGC TGAATCGTTC GGCCTGGACA AACCGGCGGG CGCCCTGGTG
GCCCAGGTGC TGGAAAACGG CCCGGCAGCC AAAGGCGGCC TGCAGGTGGG CGACGTGATC
CTCAGCATGA ACGGCCAGCC AATCGTCATG TCGGCCGATC TGCCGCACCT GGTTGGCGGC
CTCAAGGATG GCGAGAAGGC CAAGCTGGAA ATCATCCGCA ATGGCAAGCG CCAGAACCTG
GACATCAGCG TCGGCGCGCT GCCGGATGAC GACGTTGAGA TTGGCGCTGG CACCGAAGGC
GGCGCCGAGC GCAGCAGCAA CCGCCTGGGT GTATCGGTCG CCGACCTGAC CGCCGAGCAG
AAAAAGTCCC TGGAGCTCAA AGGTGGCGTG GTCATCAAGG AAGTGCAGGA TGGCCCGGCA
GCCATGATCG GCTTGCGCCC GGGTGATGTC ATCAGCCATC TGAACAACCA GGCTATCGGT
TCGGCGAAGG AATTCACCGA AATCGCCAAG GAACTGCCGA AGAACCGATC TGTGTCGATG
CGCGTGCTGC GTCAGGGCCG CGCCAGCTTC ATCACCTTCA AGCTTGCTGA ATAA
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| Protein sequence | MSIPRLKSYL MMFAAVLMLG QVLTAQAEEA LPDFTTLVEQ ASPAVVNIST KQKLPDRRIA
AGQMPDLEGL PPMFREFFER NMPQQPRSPR GDRQREAQSL GSGFIISSDG YVLTNNHVVA
DADEIIVRLS DRSELQAKLV GTDPRTDVAL LKVDGKNLPT VKLGDSEKLK VGEWVLAIGS
PFGFDHSVTK GIVSAKGRTL PNDTYVPFIQ TDVAINPGNS GGPLFNMKGE VVGINSQIFT
RSGGFMGLSF AIPIDVAIDV SNQLKKDGKV SRGWLGVVIQ EVNKDLAESF GLDKPAGALV
AQVLENGPAA KGGLQVGDVI LSMNGQPIVM SADLPHLVGG LKDGEKAKLE IIRNGKRQNL
DISVGALPDD DVEIGAGTEG GAERSSNRLG VSVADLTAEQ KKSLELKGGV VIKEVQDGPA
AMIGLRPGDV ISHLNNQAIG SAKEFTEIAK ELPKNRSVSM RVLRQGRASF ITFKLAE
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