Gene Pput_4284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4284 
Symbol 
ID5191497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4792750 
End bp4794132 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content63% 
IMG OID640588761 
Productheavy metal sensor signal transduction histidine kinase 
Protein accessionYP_001269592 
Protein GI148549490 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR01386] heavy metal sensor kinase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.677034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAACG CCAGCCTGTC GTTACGCCTG GGTCTGAGCG TGACATTGAT GGGCGCCGCA 
CTGGTGCTGC TGCTGGCCTG CCTGGCCGTG TTTGCCCTGG ATCACGAACT GGACAGCCGC
GCGCGCAAGG ATTTGGCGCG CAAGATGCTT CAGGTCGAGC ACAATCTGCG TGTCGACCTG
CGCAGCGAGG ACCTGGGCAG CCGCGCCCAT CCACTGCTGG ACCTGGTGAT GGGGCATGAC
AACCTAAGCC TCAGTGTGCT GGCTCTCGAC GGCCGCCACC CCCACCTGCT CAGCCTCGGC
CCGGCCCTGG AATCGCGGGT CGGTGAACTG CACACCGATG CGCGCCTGGC CTTTCACGCC
TGGCGTGACA GCGGCGGTAA CCAGATCCTC ACCGTTACCC GGCTGATGCG CCTGCGCGAC
AACACCCCTG TCAAGGTGAT GATGTCGCTC AACCGCGCCG ACGACAACGC CCTGTTGCAA
GCCTACCTGC ACTCGACGTT GCTCGCCTTG CCACTGCTAC TGGTTTTGAT TGGTGCGGGG
GCATGGTGGC TGATGCAGCG CGGCCTGAAA CCATTGCGGC ACTTCCGGCG CATTGCCGGG
CAGGTGTCGG CCCAGGACCT GCAGCATCGT CTGCCCGCTA CCTCCCTGCC GCAGGAACTG
GCAGACCTGG CCGGCAGTAT CAACGTGATG CTCGATCGAC TCGACCAAGG TGTCAGGCAG
CTGTCGCAGT TCTCTGACGA CCTGGCCCAT GAACTGCGCA CACCGTTGAG CAACCTGATG
GGCAAGGCGC AGGTGACACT GGCCCGTGAG CGGGACAACG CCAACTATCG GGAAGTGCTT
GAAGACAGCA TCGAAGAACT GACCCGGCTC AACCGCATCA TCAACGACAT GCTGTTTCTT
GCCCAGGTCA GCCAGCCGCA TACGCAGGTT GCGTTGAAAC CCTTGGCGCT GTCCGACGAG
GCAGCGCGGG TTGTCGAGCT GTTTGCCTAC AGTGCCGAGC TGAAAGAAAT TGAGCTACGT
GTTCAGGGCT GGGGGACAGC GCTGGGAGAC CGGCTGATGT TTCAGCGGGC ACTGTCGAAC
CTGTTGAGCA ACGCCATACG GCACAGTCCC GAGGGTAAAC CCGTGGCTCT GCGCATCGAA
CGCTCGGGCA GCGAAGTCAG GCTATCCGTG GAGAACCAGG GGCCGGGTGT GCCTGCAGAG
CACCAGTCGC GCTTGTTCGA GCGGTTTTAC CGGGTAGGTT CGGGGCGTTC GCGGCTGGAG
GGCGGGACCG GGTTGGGGTT GGCGATCGTG AAGTCGATCA TGCAGTTGCA TGGCGGGCGG
GTCGAGGTCA GCAGCTGCCC CCTGGGGCCT ACCCGGTTTA CCCTGGTGTT TCCTGCCGAG
TGA
 
Protein sequence
MKNASLSLRL GLSVTLMGAA LVLLLACLAV FALDHELDSR ARKDLARKML QVEHNLRVDL 
RSEDLGSRAH PLLDLVMGHD NLSLSVLALD GRHPHLLSLG PALESRVGEL HTDARLAFHA
WRDSGGNQIL TVTRLMRLRD NTPVKVMMSL NRADDNALLQ AYLHSTLLAL PLLLVLIGAG
AWWLMQRGLK PLRHFRRIAG QVSAQDLQHR LPATSLPQEL ADLAGSINVM LDRLDQGVRQ
LSQFSDDLAH ELRTPLSNLM GKAQVTLARE RDNANYREVL EDSIEELTRL NRIINDMLFL
AQVSQPHTQV ALKPLALSDE AARVVELFAY SAELKEIELR VQGWGTALGD RLMFQRALSN
LLSNAIRHSP EGKPVALRIE RSGSEVRLSV ENQGPGVPAE HQSRLFERFY RVGSGRSRLE
GGTGLGLAIV KSIMQLHGGR VEVSSCPLGP TRFTLVFPAE