| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4276 |
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| Symbol | |
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| ID | 5194585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4782443 |
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| End bp | 4783777 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640588753 |
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| Product | carbohydrate-selective porin OprB |
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| Protein accession | YP_001269584 |
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| Protein GI | 148549482 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.308576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCAAC TGCCTAAAAC CTGTTACATC GGCCTCGCCC TCAGTGCCTT GGCAACCCCC
GCCAGCGCCA GCGAAATGTT CGCCAGCGAC TCCCCGTGGA TGCTCGGCGA CTGGGGTGGA
ACCCGCAGCG AACTGCTGGA AAAGGGCTAC GACTTTACCC TTGGCTACAC CGGCGAGATG
GGCAGCAACC TGCACGGCGG CTACGACCAC GACCGCACCG CGCGCTACAG CGACCAGTTC
ACCTTTGGCA GCCACCTGGA CCTGGACAAG ATCCTCGGCT GGCACGACAC CGAACTCCAG
CTGACCGTCA CCGAGCGTCA CGGCGACAAC ATCAGCAACG ACCGCATCAA CGACCCGCGT
GTCGGCGGCT TCACCTCCGC CCAGGAAGTC TGGGGCCGCG GCGAAACCTG GCGATTGACG
CAGATGTGGA TCAAGCAGAA GTACTTCGAC GGTGCGCTGG ATGTGAAATT CGGCCGCTTC
GGTGAAGGCG AGGACTTCAA CAGCTTCCCT TGCGACTTCC AGAACCTGGC CTTCTGCGGC
TCGCAGGTGG GCAACTGGGT AGGTGGCATC TGGTACAACT GGCCAGTCAG CCAGTGGGCC
CTGCGCGTGC GCTACAACCT TACCCCTGAG CTGTACGCAC AGGTCGGCGT CTTCGAGCAG
AACCCTTCCA ACCTTGAATC TGGCAATGGT TTCAAGCTCA GCGGCAGCGG CACCCAAGGT
GCGGTAATGC CGTTCGAACT GGTATGGACC CCACGTATCC AAGGCTTGAA AGGGGAATAT
CGTGCCGGCT ACTACTACAG TAATGCCAAG GCACAAGATG TTCTCAAGGA CAGCAACGGT
CAGCCGGCCG CCATCAGCGG CGCCGCCTAC CGCAGCAGCT CGAGCAAGCA CGGCTTGTGG
ATTGGCGCCC AGCAGCAGGT CACCTCGCTG GCGTCCGACC AGTCACGCGG CTTGAGCGTG
TTCACCAACG CCACCGTGCA TGACAAGAAG ACCAATGCCA TCGACAACTA TGTGCAGGCA
GGACTGGTAT TCAAAGGGCC CTTCGATGCC CGCGCCAAGG ACGACATCGG TTTCGCCCTG
GCCCGCGTGC ACGTCAACCC TGCCTATCGC AAGAACGCCC GCCTGGCCAA CCAGGCCGCC
GGCCTCTACG ACTACGACAA CCCAGGCTTC CTGCCCGTGC AGGACACCGA GTACAGCGCC
GAGCTGTACT ACGGCATCCA TTTGGCCGAC TGGCTCACGG TACGCCCCAA CCTGCAGTAC
ATCCGCCACC CGGGCGGGGT GTCGCAGGTG GATGGCGCCC TGATCGGCGG CCTGAAGATC
CAGAGCAGTT TCTAA
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| Protein sequence | MFQLPKTCYI GLALSALATP ASASEMFASD SPWMLGDWGG TRSELLEKGY DFTLGYTGEM
GSNLHGGYDH DRTARYSDQF TFGSHLDLDK ILGWHDTELQ LTVTERHGDN ISNDRINDPR
VGGFTSAQEV WGRGETWRLT QMWIKQKYFD GALDVKFGRF GEGEDFNSFP CDFQNLAFCG
SQVGNWVGGI WYNWPVSQWA LRVRYNLTPE LYAQVGVFEQ NPSNLESGNG FKLSGSGTQG
AVMPFELVWT PRIQGLKGEY RAGYYYSNAK AQDVLKDSNG QPAAISGAAY RSSSSKHGLW
IGAQQQVTSL ASDQSRGLSV FTNATVHDKK TNAIDNYVQA GLVFKGPFDA RAKDDIGFAL
ARVHVNPAYR KNARLANQAA GLYDYDNPGF LPVQDTEYSA ELYYGIHLAD WLTVRPNLQY
IRHPGGVSQV DGALIGGLKI QSSF
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