| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4275 |
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| Symbol | |
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| ID | 5194584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4780090 |
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| End bp | 4782147 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640588752 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001269583 |
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| Protein GI | 148549481 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTACA CACCGCTTCG CCTCTCCCCC CTTGCCGTCG CACTCTGGCT GGCTGCATCC
CCCAGCCAGG CCGTAGAACT TGAGCCACAG GTCATCACCG CCAACCCGCT GGGCAACCGC
CAACTGGCGG CTCCCAGCAC CGTGCTCGAA GGCGACAACC TGCTGCAACA GCAGCACGGC
AGCCTCGGTG AAACCCTGAA CAAGCAGCCC GGTGTCGCCT CTACCTGGTT CGGCCCTGGC
GCCAGCCGAC CGGTCATTCG CGGCCTGGAC GGCGACCGCA TCCGCATTCT GCGCAACGGC
GTCGGCGCCC TGGATGCCTC GTCGCTGTCC TATGACCACG CCGTGCCCCT GGACCCGGTG
ACGGTCGATC GCGTCGAAAT CGTCCGTGGC CCGGCCGCCT TGCTGTATGG CGGTAACGCC
ATCGGCGGCG TGGTCAACAC CTTCGACAAC CGCATCCCGG ACTCGCCGAT CGAGGGCATC
CACGGTGCCG GCGAACTGCG TTACGGCGGC GCCGACACCA CCCGCAGCAG CGCCGGCAAG
CTGGAGGCCG GCGACGGCGC CTTCGCCCTG CACCTGGACG CCAACAGCCG CCAGTTCAAC
GACCTGCGCA TCCCGGGCTA CGCACGCAGC GCCAAGGTGC GCGATACCGA CGAGCCCGGC
AGCAAACACC GCCTGGAAAA CAGCGACGGT CGCCAGGACG GCGGCGCAAT CGGTGGTGCC
TACCACTGGG ACCACGGCTA CGCCGGCCTG TCGTACAGCC GCTACGACAG CAACTACGGC
TCGGTGGCCG AGTCCGGCGT GCGCCTGGAC ATGAAGCAGG ATCACTACGC CTTCGCCTCC
GAACTGCGCG ACCTCGACGG CCCGTTCAGC TCGGTCAAGG TAGATGCCGG CTACACCGAC
TACGAACACA GCGAAATCGA GGAAGGCGAG GTCCATACCA CCTTCAAGAA CAAGGGCTAC
GAAGCCCGCA TCGAAGCCCG TCACCAGCCG CTCGGACCGG TGGAAGGGAT GATCGGTGCC
CAGGTCAGCC GCAACGAATT CTCCGCCCTG GGCGAGGAAG CCTTCGTCCC GCACACCGAT
ACCGACAGCC TGGCGCTGTT CATGCTGGAG CAGTGGCAAG CCACCGAACG CCTGAACCTG
AGCCTGGGCG CGCGCATGGA GCACACCCGC GTAGACCCGG ACGCCAAAGG CAACGAGAAC
TTCGTCGACG CCGACAGCGC CAGCAGCTTC AACGCCTTCA GCCTGTCGTC GGGGGCCGTG
TACCAACTCG ACCCGATCTG GTCGCTGGCC GCCAACCTCG GCTACACCGA GCGCGCCCCT
ACCTTTTACG AGCTGTACGC CAATGGCGCG CACGTAGCCA CCGGCGCGTT TGAAGTTGGT
GACGCCAGCC TGAACAAGGA AAAGGCGATT TCCGCCGACC TGGCGCTGCG CTTCGACAAC
GGCACCCACA AGGGCAGTGT TGGGGTGTTC TACAGCCACT TTCGCAACTA CATCGGCCTG
ATCGGCACCG GCAACCTGCG TGAGGGCGGG CATGATCACG ACCATGACGA GGATGACCAC
GACCACGACC ACGACCACGA TCATGACGAC GGCTTCCCGG AATACCAGTA CCAAGGCGTG
CGGGCGCGCT TCTACGGCAT CGAGGCCCAG GACCGCTGGC AGTTGGCCGA GAACCGTTAC
GGCAGCTTTG CGCTGGAGTT GTCCGGTGAC TACACCCGGG CCAAGAACCT GGACAGCGGC
GAGCCACTGC CCCGCATCGC CCCGCTGCGC CTGAACAGCG GTCTGGTCTG GGAACTGGAC
CGCTGGCAGG CGCGAGTAGA CGTGCAGCAC GCTGCGTCGC AGCACCGCAA ACCCGCCAAC
GAAACCGGCA CCGATGGCTA CACCACCTTG GGGGCCAGCG TTGGCTACCG CTTCGACATT
GGCCAGAGCC AGTGGCTGGC GTTTGTACGC GGCGAAAACC TCACCGACCA GACCGTGCGC
TACGCCAGTT CGATCCTGCG CGATATCGCA CCGGCGCCGG GGCGCAGTGT GGAAGTCGGG
TTGCGTACCA CCTTCTGA
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| Protein sequence | MLYTPLRLSP LAVALWLAAS PSQAVELEPQ VITANPLGNR QLAAPSTVLE GDNLLQQQHG
SLGETLNKQP GVASTWFGPG ASRPVIRGLD GDRIRILRNG VGALDASSLS YDHAVPLDPV
TVDRVEIVRG PAALLYGGNA IGGVVNTFDN RIPDSPIEGI HGAGELRYGG ADTTRSSAGK
LEAGDGAFAL HLDANSRQFN DLRIPGYARS AKVRDTDEPG SKHRLENSDG RQDGGAIGGA
YHWDHGYAGL SYSRYDSNYG SVAESGVRLD MKQDHYAFAS ELRDLDGPFS SVKVDAGYTD
YEHSEIEEGE VHTTFKNKGY EARIEARHQP LGPVEGMIGA QVSRNEFSAL GEEAFVPHTD
TDSLALFMLE QWQATERLNL SLGARMEHTR VDPDAKGNEN FVDADSASSF NAFSLSSGAV
YQLDPIWSLA ANLGYTERAP TFYELYANGA HVATGAFEVG DASLNKEKAI SADLALRFDN
GTHKGSVGVF YSHFRNYIGL IGTGNLREGG HDHDHDEDDH DHDHDHDHDD GFPEYQYQGV
RARFYGIEAQ DRWQLAENRY GSFALELSGD YTRAKNLDSG EPLPRIAPLR LNSGLVWELD
RWQARVDVQH AASQHRKPAN ETGTDGYTTL GASVGYRFDI GQSQWLAFVR GENLTDQTVR
YASSILRDIA PAPGRSVEVG LRTTF
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