Gene Pput_4270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4270 
Symbol 
ID5194619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4771953 
End bp4772507 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content61% 
IMG OID640588747 
Producthypothetical protein 
Protein accessionYP_001269578 
Protein GI148549476 
COG category[S] Function unknown 
COG ID[COG3034] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0547672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTGGT TGCTTGCCCT CTTCTGCCTT TGCGTTACCT CGGTGTCCCA GGCGGCCTTC 
ACCGAAACCA TCATCCGCAA GCCCGCACCG GCAGCGCAAA CCCCATCGCC TTCGCAGCAA
GCCATGCAAC CGTTGATCGA CAAGGTACTG GTGATCAAGT CCGAGCGCCG CCTGCAGTTG
ATCAGCCGTG GCGAGCCGCT GAAAACCTAC CGCATCTCGC TGGGCAAGCA GCCCAAGGGC
GCCAAGGAAC GCGAAGGCGA CAAGAAAACC CCTGAGGGCT TGTACTGGCT GGACTGGCGC
AAGCAGAGCG ACCGCTTCAA CCTGGCCATG CACATCAACT ACCCGAACAT CAGCGATGCC
GCCCGCGCGA CCCGGGCAGG GGTGAGTGCC GGCAGCATGA TCATGATTCA CGGCACGCCG
ATCAACGATG AATACCCGGA ATGGTACTTC CATACCCTGG ACTGGACGGA TGGTTGCATT
GCCATGCGCA ACCGCGACAT GCAGGAAGTG TGGGACTTGG TACGGGATGG AACGCTGATC
GAGATCAGGC CTTGA
 
Protein sequence
MRWLLALFCL CVTSVSQAAF TETIIRKPAP AAQTPSPSQQ AMQPLIDKVL VIKSERRLQL 
ISRGEPLKTY RISLGKQPKG AKEREGDKKT PEGLYWLDWR KQSDRFNLAM HINYPNISDA
ARATRAGVSA GSMIMIHGTP INDEYPEWYF HTLDWTDGCI AMRNRDMQEV WDLVRDGTLI
EIRP