| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4269 |
|---|
| Symbol | |
|---|
| ID | 5194618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 4771379 |
|---|
| End bp | 4771930 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640588746 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001269577 |
|---|
| Protein GI | 148549475 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0630119 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCT GCAGCGCGTG CGGCCAACCG GTCACTCAGC AGATCCCCGA GGGCGACAGC
CGCCTGCGGT ACGTCTGCGG CTCTTGCCAG ACCATCCACT ACCAGAACCC CAACATCGTG
GCCGGCGTGC TACCGACCTG GGGCAGCCAG GTGTTGCTGT GTCGCCGCGC CATCGAACCG
CGCCGGGGTT TCTGGACCCT GCCCGCCGGT TTCATGGAAA ACGGCGAAAC CCTCGACCAG
GCCGCGCGTC GCGAAACCGT AGAGGAAGCC TGCGCCCGGG TCGGGCCAAC GTCCCTGTAC
CAGCTGTTCG ATCTGCCGCA CATCAACCAG GTGCATGTGT TCTTCCGCGC CGAGTTGGCG
GACCTGGACT TTGCCGTGGG TGTCGAAAGC CTGGAGGTGC GCCTGTTCGA AGAACATGAG
ATACCGTGGA ACGCGCTGGC TTTCCGCACC GTCACTCGCA CACTAGAATG CTACTATCGC
GACCGCATCG GCCAGCACTA CCCCATAGGC CATGAATACC TGCCGCCGAT GAACGTTTCG
CCACACACCT AA
|
|---|
| Protein sequence | MKFCSACGQP VTQQIPEGDS RLRYVCGSCQ TIHYQNPNIV AGVLPTWGSQ VLLCRRAIEP
RRGFWTLPAG FMENGETLDQ AARRETVEEA CARVGPTSLY QLFDLPHINQ VHVFFRAELA
DLDFAVGVES LEVRLFEEHE IPWNALAFRT VTRTLECYYR DRIGQHYPIG HEYLPPMNVS
PHT
|
|---|
| |