| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4268 |
|---|
| Symbol | |
|---|
| ID | 5194290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 4770656 |
|---|
| End bp | 4771288 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640588745 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001269576 |
|---|
| Protein GI | 148549474 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.127218 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACACA GGACCTGGAT ACGAGCGTGC GCAATGCTGG ACGAGCTACT TCGCCGAATG
AGCAACCACC AACCCGCGTC ATTGGAAACC GACAGGCGGT TCCCCGAAGC GGCGGTCCTC
TTGCCCATTA CCCGCAGCGA AGCGCCCGAA CTGGTTTTGA CCCTGCGCGC CAAGGGCCTG
TCTACCCACG GTGGTGAAGT CGCCTTTCCC GGTGGCCGCC GCGACCCGGA AGACCCGGAC
CTGGTCTTTA CTGCCCTGCG CGAGGCTGAA GAAGAAATCG GCCTGCCCCC TGGCCTGGTG
GAGGTGATTG GCCCGCTCAG CCCGCTGATT TCGCTACATG GCCTGAAAGT GACGCCATTC
GTCGGGCTTA TCCCGGACTT CGTCGAGTAT CGCGCCAATG ATGCCGAGAT CGCGGCAGTA
TTCACCGTGC CGCTGGAGTT CTTCCGCCAG GACCCGCGTG ACCATACCCA CCGTATCGAT
TACCAGGGGC GTAGCTGGTA TGTGCCAAGT TACCGCTATG GTGAATACAA GATCTGGGGG
TTGTCGGCGA TCATGATCGT CGAGCTGGTC AACCTGCTGT TCGATGCCGG TATCAGCTTG
CATCAACCCC CGGAGCGTTA CATCGAAAAT TGA
|
|---|
| Protein sequence | MQHRTWIRAC AMLDELLRRM SNHQPASLET DRRFPEAAVL LPITRSEAPE LVLTLRAKGL
STHGGEVAFP GGRRDPEDPD LVFTALREAE EEIGLPPGLV EVIGPLSPLI SLHGLKVTPF
VGLIPDFVEY RANDAEIAAV FTVPLEFFRQ DPRDHTHRID YQGRSWYVPS YRYGEYKIWG
LSAIMIVELV NLLFDAGISL HQPPERYIEN
|
|---|
| |