Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4267 |
Symbol | |
ID | 5194289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4770087 |
End bp | 4770611 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640588744 |
Product | hexapaptide repeat-containing transferase |
Protein accession | YP_001269575 |
Protein GI | 148549473 |
COG category | [R] General function prediction only |
COG ID | [COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.365938 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATATC GCCTGGGCGA CCTGCGGGTC GAGAGCCACC CCACCAGTTG GGCCGCCCCC AACGCCACGC TCATTGGCAA CGTGCGCCTG CAAGCCAATG CCAGTGTGTG GTTTGGCGCG GTGTTGCGCG GTGATAACGA GCTGATCGAC ATTGGCGAAG GCAGCAACGT GCAGGATGGC ACGGTGATGC ACACTGACAT GGGCTCGCCA TTGACGTTGG GCAAGGGCGT GACCGTGGGC CACAATGCCA TGCTGCATGG CTGTACGGTG GGCGACTTCA GCCTGGTCGG TATCAACGCA GTGATCCTCA ATGGCGCACG CATCGGCAAG CACTGCATCA TCGGCGCCAA CGCACTGATT GCCGAGGGCA AGGAAATCCC GGACGGTTCG CTGGTGATGG GCTCGCCGGG CAAGGTGATA CGCGAGCTGA CCGAACAGCA GAAACGCATG CTGGAAGCGA GTGCTGCACA TTACGTGCAT AATGCCCAGC GTTATGCGCA AGCGTTGGTG GTTGATGATG AGTGA
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Protein sequence | MKYRLGDLRV ESHPTSWAAP NATLIGNVRL QANASVWFGA VLRGDNELID IGEGSNVQDG TVMHTDMGSP LTLGKGVTVG HNAMLHGCTV GDFSLVGINA VILNGARIGK HCIIGANALI AEGKEIPDGS LVMGSPGKVI RELTEQQKRM LEASAAHYVH NAQRYAQALV VDDE
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