| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4262 |
|---|
| Symbol | |
|---|
| ID | 5193597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 4765055 |
|---|
| End bp | 4766260 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640588739 |
|---|
| Product | transporter-associated region |
|---|
| Protein accession | YP_001269570 |
|---|
| Protein GI | 148549468 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4536] Putative Mg2+ and Co2+ transporter CorB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACACCC TGCCGTACGC ACCGCTATTC GGCACTCTGG CACTGGCCCT TTTGTGGTCA
GCACTGTTCA CCGCCGTGGA TGCTGCCCGC CTGCAGCTCA ATGGCGCACT GCGCGCCGGC
GAAGATGGCC ATCCCGTGCT GCCGGCCCAG GCCTTGGTGC TGTGCGCCAG CCTGGGCAAG
CTACTGGTGC TGGGGCTGGC CTGCCTGATG GGCCAGCGCC AGAGCGGCGA GCACGGCTTC
TGGCTGGCAG GCCTGGCGGC GACCCTCGCC TTACTGGTGT TTGCCGAATA CCTGCCGCGG
CGCCTGGCCC GGCGTAACCC GCAGGCGTTT GTGAGCCTTG GCGCCAGCCT GCTGAAAGTG
CCTCTCGCAC TGCTGCAGCC ACTGGCCTGC CTGCTGGACG GCGCCGCCAA GCTCATGCTG
CGCCCGTTCC GCGCACAGCC CACCGCTGTG GCCCTGCACA CGCAGGATGC CGACGACTTC
GATGAGGATG AACCGCACGA AGCGCCTCGC CATGGCCTGC TCGACGGCCT GCAGTCGTTG
GACAAGATCA CCGTCAACGA CATCCTGGTG CCGCGCAACG AAGTAGATGG CATCAACCTG
GACGAGCCGA TCGAACGCAT CATCGAGCAG TTGATCGTCA GCCGCCACAC CCGCCTGCCG
GTCTACCACA ACGACATCAA CCAGGTCGAA GCGATCCTCA ACACCAAGCT GATCAGCCAC
CTGCTGCCCA AGGCCGAGCT GACCCTGGAA GCGCTGCACC GCGCCTGCTA CGAACCCTAT
TTCGTACCGG AAAGCACGCC CCTGCAAATG CAGTTGTTGA ACTTCCACAA GCAGCAACGC
CGCTTGGGCG TGGTGGTGGA CGAGTACGGC GAAGTACTGG GTATCGTCAC CCTGGAAGAT
ATTCTCGAAG AGATCGTCGG CGAGTTCGAG GACGAGCAAA GCCTGGAAAA CCCGCATGTG
CATCCGCAAC CCGATGGCAC CTTCGTCATC GATGGCACCG CTTCGTTACG CGAAATCAAC
CGCACCCTGA GCTGGCACCT GCCCTGCGAC GGCGGGCCGA AAACCCTCAA CGGGCTGGTC
ACCGAAGCGC TGGAAAGCAT CCCGGAAAGC GCTGTTTGCC TGAAGATAGG CCGCTATCGC
CTGGAAATCC TTGAAACAGA GGACAATTGC GCCAGCAAGG TACTGGTGTG GACCGTGACC
CGATAG
|
|---|
| Protein sequence | MDTLPYAPLF GTLALALLWS ALFTAVDAAR LQLNGALRAG EDGHPVLPAQ ALVLCASLGK
LLVLGLACLM GQRQSGEHGF WLAGLAATLA LLVFAEYLPR RLARRNPQAF VSLGASLLKV
PLALLQPLAC LLDGAAKLML RPFRAQPTAV ALHTQDADDF DEDEPHEAPR HGLLDGLQSL
DKITVNDILV PRNEVDGINL DEPIERIIEQ LIVSRHTRLP VYHNDINQVE AILNTKLISH
LLPKAELTLE ALHRACYEPY FVPESTPLQM QLLNFHKQQR RLGVVVDEYG EVLGIVTLED
ILEEIVGEFE DEQSLENPHV HPQPDGTFVI DGTASLREIN RTLSWHLPCD GGPKTLNGLV
TEALESIPES AVCLKIGRYR LEILETEDNC ASKVLVWTVT R
|
|---|
| |