| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4260 |
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| Symbol | |
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| ID | 5192666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4762547 |
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| End bp | 4763923 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640588737 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_001269568 |
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| Protein GI | 148549466 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGAAA ACCTGACCGA CCGCCTGTCA CAGACGCTGC GCCATGTCAC CGGCAAGGCC
AAGCTGACCG AAGACAACAT CAAGGACACG CTGCGCGAAG TGCGCATGGC GCTGCTCGAG
GCCGACGTTG CCCTGCCGGT CGTCAAGGAT TTCGTCAACA GCGTCAAGGA TCGTGCGGTC
GGGACCGAGG TGTCGCGCAG CCTGACCCCG GGCCAGGCTT TCGTGAAGAT CGTCCAGGCC
GAGCTGGAAA GCCTGATGGG CGCGGCCAAC GAAGACCTCG CCCTGAACGC CGCCCCGCCT
GCTGTCGTGC TGATGGCGGG CCTGCAGGGC GCCGGTAAGA CCACCACTGC CGGCAAGCTG
GCGCGCTTTC TTAAAGAGCG CAAGAAAAAG AGCGTGATGG TGGTGTCTGC CGACGTCTAT
CGTCCGGCGG CGATCAAGCA GTTGGAAACA CTGGCCAACG ATATCGGCGT CACCTTCTTC
CCGTCCGATA TCAGCCAGAA GCCGGTGGCC ATCGCCGAAG CCGCCATCCG TGAAGCCAAG
CTGAAGTTCA TCGACGTGGT CATCGTCGAC ACCGCGGGCC GTCTGCACAT CGACGCCGAC
ATGATGGACG AGATCAAGGC GCTGCACGCT GCCGTCAAAC CGATCGAGAC GCTGTTCGTG
GTCGACGCCA TGACCGGCCA GGACGCTGCC AACACCGCCA AGGCCTTTGG CGAGGCGCTG
CCGCTGACCG GTGTGGTGCT GACCAAGGTC GACGGTGACG CCCGTGGCGG TGCTGCGCTG
TCGGTACGTG CAATCACCGG CAAACCGATC AAGTTCATCG GTATGGGTGA GAAGACCGAG
GCCCTCGAGC CGTTCCACCC CGACCGCGTC GCTTCGCGCA TCCTCGGCAT GGGCGACGTG
CTCAGTCTGA TCGAGCAGGC TGAGCAGACC ATCGACAAGG CCAAGGCCGA CAAGCTGGCC
AAGAAGCTGA AGAAAGGCAA GGGCTTCGAC CTCGAAGACT TCCGTGACCA GCTGCAGCAA
ATGAAGAACA TGGGCGGCCT CGGCGGCCTG ATGGACAAGC TGCCAAGCAT CGGCGGGGTC
AACCTGTCAC AAATGGGCAA CGCCCAGGGC GCGGCCGAAA AGCAGTTCAA GCAGATGGAA
GCGATCATCA ACTCCATGAC CCCGGCCGAG CGCCGCGACC CTGACCTGAT CAGCGGTTCG
CGCAAGCGCC GTATTGCGTT GGGTTCCGGT ACCCAGGTGC AGGACATCGG TCGGCTGATC
AAGCAGCACA AGCAGATGCA GAAGATGATG AAGAAGTTTT CTGCCAAAGG CGGCATGGCC
AAGATGATGC GCGGCCTCGG TGGGATGCTG CCAGGTGGCG GCATGCCAAA GCTGTAA
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| Protein sequence | MFENLTDRLS QTLRHVTGKA KLTEDNIKDT LREVRMALLE ADVALPVVKD FVNSVKDRAV
GTEVSRSLTP GQAFVKIVQA ELESLMGAAN EDLALNAAPP AVVLMAGLQG AGKTTTAGKL
ARFLKERKKK SVMVVSADVY RPAAIKQLET LANDIGVTFF PSDISQKPVA IAEAAIREAK
LKFIDVVIVD TAGRLHIDAD MMDEIKALHA AVKPIETLFV VDAMTGQDAA NTAKAFGEAL
PLTGVVLTKV DGDARGGAAL SVRAITGKPI KFIGMGEKTE ALEPFHPDRV ASRILGMGDV
LSLIEQAEQT IDKAKADKLA KKLKKGKGFD LEDFRDQLQQ MKNMGGLGGL MDKLPSIGGV
NLSQMGNAQG AAEKQFKQME AIINSMTPAE RRDPDLISGS RKRRIALGSG TQVQDIGRLI
KQHKQMQKMM KKFSAKGGMA KMMRGLGGML PGGGMPKL
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