Gene Pput_4251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4251 
Symbol 
ID5193568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4754785 
End bp4756089 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content62% 
IMG OID640588728 
Producthomoserine dehydrogenase 
Protein accessionYP_001269559 
Protein GI148549457 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0460] Homoserine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.474195 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACCGG TCAAAGTAGG CATCTGTGGG TTGGGGACCG TCGGTGGCGG AACCTTCAAT 
GTACTTCAGC GCAACGCCGA GGAGATTGCC CGCCGTGCCG GGCGCGGTAT TGAAGTGGCA
CAGATCGCCA TGCGCTCGCA GAACCCGAAC TGCCAGATTA CCGGTACCCC CATTACCGCT
GACGTGTTCG AAGTTGCAAG CAACCCGGAG ATCGACATTG TCATCGAGCT GATCGGTGGC
TATACCATCG CCCGCGACCT GGTGCTGAAG GCCATCGAAA ACGGCAAGCA CGTGGTCACT
GCCAACAAGG CGCTGATTGC CGTGCACGGC AACGAAATCT TCGCCAAAGC TCGCGAGAAG
GGCGTGATTG TCGCTTTCGA GGCGGCCGTA GCCGGTGGCA TCCCGGTGAT CAAGGCCATC
CGCGAAGGCC TGTCGGCCAA CCGCATCAAC TGGCTGGCTG GCATCATCAA CGGCACTGGC
AACTTCATCC TCACCGAAAT GCGTGAGAAG GGCCGTGCCT TCCCGGACGT GCTGGCCGAA
GCTCAAGCGC TGGGCTACGC CGAAGCCGAC CCGACCTTTG ACGTAGAAGG CATTGACGCT
GCGCACAAGC TGACGATCCT GGCGTCCATC GCGTTCGGTA TCCCGCTGCA GTTCGACAAG
GCCTACACCG AAGGTATCAC CCAGCTGACA ACGGCAGACG TGAACTACGC CGAGGCGTTG
GGCTACCGCA TCAAGCACCT GGGCGTGGCG CGTCGCACCG CCGAAGGTAT CGAGCTGCGC
GTGCACCCGA CGCTGATCCC GGCCGACCGT CTGATCGCCA ACGTCAACGG CGTGATGAAC
GCTGTCATGG TCAACGGTGA TGCTGCCGGC TCCACCCTGT ACTACGGTGC CGGCGCGGGT
ATGGAGCCTA CCGCTTCGTC AGTGGTCGGC GACCTGGTCG ACGTGGTCCG TGCCATGACC
TCCGACCCGG AAAACCGTGT GCCGCACCTG GCCTTCCAGC CAGACTCGCT GTCGGCCCAC
CCGATCCTGC CGATCGAAGC CTGCGAAAGC GCCTACTACC TGCGTATCCA GGCCAAGGAT
CACCCGGGCG TACTGGCCCA GGTCGCCAGC ATCCTCTCGG AGCGCGGTAT CAACATCGAG
TCGATCATGC AGAAGGAAGC CGAGGAACAG GATGGCCTGG TGCCAATGAT CCTGGTGACC
CATGGCGTGG TCGAGCAGCG TATCAATGAC GCCATCGTCG CCCTGGAAGC CCTGCAGGAC
GTGGTCGGCA AGGTTGTGCG CATTCGCGTC GAGCAGCTCA ACTAA
 
Protein sequence
MKPVKVGICG LGTVGGGTFN VLQRNAEEIA RRAGRGIEVA QIAMRSQNPN CQITGTPITA 
DVFEVASNPE IDIVIELIGG YTIARDLVLK AIENGKHVVT ANKALIAVHG NEIFAKAREK
GVIVAFEAAV AGGIPVIKAI REGLSANRIN WLAGIINGTG NFILTEMREK GRAFPDVLAE
AQALGYAEAD PTFDVEGIDA AHKLTILASI AFGIPLQFDK AYTEGITQLT TADVNYAEAL
GYRIKHLGVA RRTAEGIELR VHPTLIPADR LIANVNGVMN AVMVNGDAAG STLYYGAGAG
MEPTASSVVG DLVDVVRAMT SDPENRVPHL AFQPDSLSAH PILPIEACES AYYLRIQAKD
HPGVLAQVAS ILSERGINIE SIMQKEAEEQ DGLVPMILVT HGVVEQRIND AIVALEALQD
VVGKVVRIRV EQLN