Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4251 |
Symbol | |
ID | 5193568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4754785 |
End bp | 4756089 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640588728 |
Product | homoserine dehydrogenase |
Protein accession | YP_001269559 |
Protein GI | 148549457 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0460] Homoserine dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.474195 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAACCGG TCAAAGTAGG CATCTGTGGG TTGGGGACCG TCGGTGGCGG AACCTTCAAT GTACTTCAGC GCAACGCCGA GGAGATTGCC CGCCGTGCCG GGCGCGGTAT TGAAGTGGCA CAGATCGCCA TGCGCTCGCA GAACCCGAAC TGCCAGATTA CCGGTACCCC CATTACCGCT GACGTGTTCG AAGTTGCAAG CAACCCGGAG ATCGACATTG TCATCGAGCT GATCGGTGGC TATACCATCG CCCGCGACCT GGTGCTGAAG GCCATCGAAA ACGGCAAGCA CGTGGTCACT GCCAACAAGG CGCTGATTGC CGTGCACGGC AACGAAATCT TCGCCAAAGC TCGCGAGAAG GGCGTGATTG TCGCTTTCGA GGCGGCCGTA GCCGGTGGCA TCCCGGTGAT CAAGGCCATC CGCGAAGGCC TGTCGGCCAA CCGCATCAAC TGGCTGGCTG GCATCATCAA CGGCACTGGC AACTTCATCC TCACCGAAAT GCGTGAGAAG GGCCGTGCCT TCCCGGACGT GCTGGCCGAA GCTCAAGCGC TGGGCTACGC CGAAGCCGAC CCGACCTTTG ACGTAGAAGG CATTGACGCT GCGCACAAGC TGACGATCCT GGCGTCCATC GCGTTCGGTA TCCCGCTGCA GTTCGACAAG GCCTACACCG AAGGTATCAC CCAGCTGACA ACGGCAGACG TGAACTACGC CGAGGCGTTG GGCTACCGCA TCAAGCACCT GGGCGTGGCG CGTCGCACCG CCGAAGGTAT CGAGCTGCGC GTGCACCCGA CGCTGATCCC GGCCGACCGT CTGATCGCCA ACGTCAACGG CGTGATGAAC GCTGTCATGG TCAACGGTGA TGCTGCCGGC TCCACCCTGT ACTACGGTGC CGGCGCGGGT ATGGAGCCTA CCGCTTCGTC AGTGGTCGGC GACCTGGTCG ACGTGGTCCG TGCCATGACC TCCGACCCGG AAAACCGTGT GCCGCACCTG GCCTTCCAGC CAGACTCGCT GTCGGCCCAC CCGATCCTGC CGATCGAAGC CTGCGAAAGC GCCTACTACC TGCGTATCCA GGCCAAGGAT CACCCGGGCG TACTGGCCCA GGTCGCCAGC ATCCTCTCGG AGCGCGGTAT CAACATCGAG TCGATCATGC AGAAGGAAGC CGAGGAACAG GATGGCCTGG TGCCAATGAT CCTGGTGACC CATGGCGTGG TCGAGCAGCG TATCAATGAC GCCATCGTCG CCCTGGAAGC CCTGCAGGAC GTGGTCGGCA AGGTTGTGCG CATTCGCGTC GAGCAGCTCA ACTAA
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Protein sequence | MKPVKVGICG LGTVGGGTFN VLQRNAEEIA RRAGRGIEVA QIAMRSQNPN CQITGTPITA DVFEVASNPE IDIVIELIGG YTIARDLVLK AIENGKHVVT ANKALIAVHG NEIFAKAREK GVIVAFEAAV AGGIPVIKAI REGLSANRIN WLAGIINGTG NFILTEMREK GRAFPDVLAE AQALGYAEAD PTFDVEGIDA AHKLTILASI AFGIPLQFDK AYTEGITQLT TADVNYAEAL GYRIKHLGVA RRTAEGIELR VHPTLIPADR LIANVNGVMN AVMVNGDAAG STLYYGAGAG MEPTASSVVG DLVDVVRAMT SDPENRVPHL AFQPDSLSAH PILPIEACES AYYLRIQAKD HPGVLAQVAS ILSERGINIE SIMQKEAEEQ DGLVPMILVT HGVVEQRIND AIVALEALQD VVGKVVRIRV EQLN
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