| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4250 |
|---|
| Symbol | |
|---|
| ID | 5190987 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 4753316 |
|---|
| End bp | 4754725 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640588727 |
|---|
| Product | threonine synthase |
|---|
| Protein accession | YP_001269558 |
|---|
| Protein GI | 148549456 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0498] Threonine synthase |
|---|
| TIGRFAM ID | [TIGR00260] threonine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.941259 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTATA TCAGTACCCG CGGCCAGGCA CCGGCCCTGA ATTTCGAAGA CGTGCTGCTG
GCTGGCCTGG CCAGCGACGG CGGCCTCTAC GTGCCGGAAA ACCTGCCACG CTTCACTCAG
GAAGAAATCG CCTCGTGGGC CGGCTTGCCC TACCACGAGC TGGCCTTCCG CGTGATGCGT
CCGTTCGTCG AGGGCAGCAT CGCCGACGCC GATTTCAAGA AGATCCTCGA AGAAACCTAC
GGCGAGTTCG CCCACGCTGC GGTCGCCCCG TTGCGTCAGC TGAACAGCAA CGAGTGGGTG
CTGGAGCTGT TCCACGGCCC GACCCTGGCG TTCAAGGACT TTGCCCTGCA GTTGCTCGGT
CGCCTGCTTG ACCATGTGCT GGCCAAGCGC AACGAGCGCG TGGTCATCAT CGGTGCCACC
AGCGGTGATA CCGGTTCCGC TGCAATCGAA GGCTGCCGCC GTTGCGACAA CGTCGACATC
TTCATCCTGC ACCCGCACCA GCGTGTATCG GAAGTGCAGC GCCGTCAGAT GACTACCATC
TTTGGCGACA ACATCCACAA CATCGCCATC GAAGGCAACT TCGACGACTG CCAGGAAATG
GTCAAGGCCA GTTTCGCCGA CCAGTCGTTC CTCAAGGGCA CCCGCCTGGT CGCCGTCAAC
TCGATCAACT GGGCGCGGAT CATGGCCCAG ATCGTCTACT ACTTCCATGC AGCCCTGCAG
CTGGGCGGCC CGGCGCGCTC GGTGGCGTTC TCGGTACCAA CCGGCAACTT CGGCGACATC
TTCGCCGGCT ACCTGGCGCG CAACATGGGC CTGCCGGTCA GCCAATTGAT CGTCGCCACC
AACCGCAACG ACATCCTGCA CCGCTTCATG AGCGGCAACC AGTACGTCAA GGAAACCCTG
CACGCGACCC TGTCGCCGTC GATGGACATC ATGGTCTCGT CCAACTTCGA GCGCCTGCTG
TTCGACCTGC ATGGCCGCAA CGGTGGTGCG ATTGCCGAGC TGATGGCCAA CTTCAAGCAA
GGTGGTGGCT TCAGCGTCGA GCAAGACCGC TGGACCGAAG CCCGCAAACT GTTCGACTCG
CTGGCTGTCA GCGACGAGCA AACCTGCGAG ACCATCGCAG AAGTGTTCGC CGCCACCGGT
GAAGTGCTCG ACCCGCATAC CGCAATCGGC GTGAAGGCTG CCCGCGAGTG CCGCCGCAGC
CTGGACACGC CAATGGTGGT GCTGGGTACC GCGCACCCGG TCAAGTTCCC GGACGCGGTG
GAGAAGGCCG GTGTGGGCAA GGCGCTGGAG CTACCCGCGC ACCTCAGCGA CCTGTTCAGC
CGTGAAGAGC GTTGCACGGT CCTGGCCAAT GACCTGAAGG CTGTACAGGG CTTTGTCAGC
CAGCACGGCA ACCGCGGCAA GCCGCTGTAA
|
|---|
| Protein sequence | MRYISTRGQA PALNFEDVLL AGLASDGGLY VPENLPRFTQ EEIASWAGLP YHELAFRVMR
PFVEGSIADA DFKKILEETY GEFAHAAVAP LRQLNSNEWV LELFHGPTLA FKDFALQLLG
RLLDHVLAKR NERVVIIGAT SGDTGSAAIE GCRRCDNVDI FILHPHQRVS EVQRRQMTTI
FGDNIHNIAI EGNFDDCQEM VKASFADQSF LKGTRLVAVN SINWARIMAQ IVYYFHAALQ
LGGPARSVAF SVPTGNFGDI FAGYLARNMG LPVSQLIVAT NRNDILHRFM SGNQYVKETL
HATLSPSMDI MVSSNFERLL FDLHGRNGGA IAELMANFKQ GGGFSVEQDR WTEARKLFDS
LAVSDEQTCE TIAEVFAATG EVLDPHTAIG VKAARECRRS LDTPMVVLGT AHPVKFPDAV
EKAGVGKALE LPAHLSDLFS REERCTVLAN DLKAVQGFVS QHGNRGKPL
|
|---|
| |