Gene Pput_4245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4245 
Symbol 
ID5193844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4749449 
End bp4749991 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content58% 
IMG OID640588722 
ProductYaeQ family protein 
Protein accessionYP_001269553 
Protein GI148549451 
COG category[S] Function unknown 
COG ID[COG4681] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAGC CGTCCACCAC CTACAAGTTC GAATTGAATC TCACCGACCT TGATCGCAAC 
GTCTACGAAA GCGTCAAACA GACTATCGCT CGGCACCCTT CGGAAACCGA AGAACGCATG
GCAGTTCGTT TGTTGGCGTA CGCGCTCTGG TACAACGAGA ACTTGTCGTT TGGCCGCGGC
CTGTCGGATG TCGATGAGCC AGCGCTGTGG GAAAAGAGCC TGGACGATCG CGTGCTGCAC
TGGATTGAAG TTGGCCAGCC CGATGCCGAT CGTCTGACCT GGTGCTCGCG TCGTACCGAA
CGCACCAGCT TGCTGGCTTA CGGCAGCCTG CGAGTGTGGG AGGGTAAAGT GGTGAGCGCG
GTCAAGAACC TGAAAAACCT GAGCATTGCC GCTGTGCCGC AAGAGGTGCT GGAAACCCTG
GCGACCGACA TGCCGCGTAG CATCAAGTGG GACGTGATGA TCAGTGAAGG TACGGTATTC
GTGACTGACG ACCGTGGCCA GCATGAAGTA CAACTGCAGT GGCTGCTCGG TGAGCGTGGT
TGA
 
Protein sequence
MAQPSTTYKF ELNLTDLDRN VYESVKQTIA RHPSETEERM AVRLLAYALW YNENLSFGRG 
LSDVDEPALW EKSLDDRVLH WIEVGQPDAD RLTWCSRRTE RTSLLAYGSL RVWEGKVVSA
VKNLKNLSIA AVPQEVLETL ATDMPRSIKW DVMISEGTVF VTDDRGQHEV QLQWLLGERG