| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4244 |
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| Symbol | |
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| ID | 5191239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4747731 |
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| End bp | 4749440 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640588721 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_001269552 |
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| Protein GI | 148549450 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATCG AACCTCGTCC GCTGCCGCCG ACCCTGCCAT TTCTGGGTAA CCTGCCACCC
TTGCTGACCC GCCTTTACGC CGCGCGCGGC GTGCAGAGCG AGGCCGAGCT GGACAAAAGC
CTGGCACGCC TGCTGCCGTA CCAGCAGCTC AAGGGCATCG AGGCCGGTGT GGACCTGCTG
GTCGAAGCGA TCGACCAGCG CCAGCGCATC CTCATCGTCG GCGACTTCGA TGCCGACGGT
GCCACCGCCA GCACTGTCGG GGTGCTGGGC CTGCGCCTGT TGGGTGCGGC CCACGTCGAT
TACCTGGTGC CCAACCGCTT CGAGTACGGC TACGGCCTGA CTCCGGAAAT CGTCGAGGTG
GCGCTGCAGC GCCAGCCGCA GTTGCTGATT ACCGTGGACA ACGGCATTTC CAGTGTTGAC
GGCGTGGCGG CCGCCAAGGC CGCCGGGCTC AAGGTGTTGG TCACCGACCA CCACCTGCCG
GGCGAGCAGT TGCCCGACGC CGATGCCATC ATCAACCCCA ACCAGCCGGG CTGCAGCTTT
CCGAGCAAGT CCCTGGCCGG GGTAGGGGTG ATCTTCTATG TGTTGATGGC CCTGCGCGCT
CGCTTGCGCA GCCTTGGGCG CTACGAGGCG CAGCCACAGC CGAACATTGG CGAGCTGCTC
GATCTGGTGG CGCTGGGCAG TGTTGCTGAC GTGGTGCCGC TGGATGCCAA CAACCGCATC
CTGGTGCACC AAGGCCTCGA GCGCATCCGC GCCGGCCGAG CCCGACCGGG GCTGAAGGCC
ATTCTCGAAG TGGCCCGCCG TGATCACCGG CGCATCACCT CGACCGACCT CGGTTTCATC
CTCGGCCCGC GGTTGAACGC CGCAGGACGG CTGGACGACA TGAGCCTGGG TATCGAATGC
CTGCTGTGTG AGGACGCGGC GCTGGCCCAG GACATGGCCC AGCAGCTGGA CGACCTGAAC
CAGGACCGCA AGTCCATCGA GCAGGGCATG CAGCGCGAGG CCCTGGCCCA GCTCAAGGAC
CTGCCGGTCG AGTCCATGCC CTACGGCTTG TGCCTGTTCG ATGCCGATTG GCACCAAGGG
GTGATCGGTA TTCTGGCTTC GCGTCTGAAG GAACGTTACC ACCGGCCGAC CATTGCATTC
GCTGATGCTG GCGACGGCAT GCTCAAAGGT TCGGCGCGCT CGGTGCCGGG CTTCCATATT
CGCGATGCGC TGGATGCCGT GGCCGCGCGC CACCCGCACC TGATCAGCAA GTTCGGCGGC
CACGCCATGG CTGCCGGGTT GTCGTTGCCA GAAGGTAACT TCCCGGCATT CGCCAAGGCC
TTCGACGAAG AAGTGCGGCG TCAACTGCGC GAAGAAGACC TGACCGGCCG GCTGTTGTCC
GACGGCAGCC TGGCGGTAGA GGAGTTCCAC CTCGACCTGG CCAAGGCCCT GCGCCATGCC
GGCCCATGGG GCCAGCACTT CCCTGAGCCA TTGTTCCATG GCGTGTTCCA GCTGGTGGAG
CAGCGTGTGG TTGGCGAGCG GCACCTGAAG GTGGTGCTCA AGAGCGAGTG TGGCTCGGTA
CGGCTGGATG GCATTGCCTT CGGCGTCGAT CGCGAAGTGT GGCCGAACCC GACCGTGCGT
TGGGTCGAGT TGGCGTACAA ACTGGATGTG AACGAGTTTC GCGGCAATGA AAGTGTGCAG
TTGATGATTG CCCACATGGA GCCGCGCTGA
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| Protein sequence | MRIEPRPLPP TLPFLGNLPP LLTRLYAARG VQSEAELDKS LARLLPYQQL KGIEAGVDLL
VEAIDQRQRI LIVGDFDADG ATASTVGVLG LRLLGAAHVD YLVPNRFEYG YGLTPEIVEV
ALQRQPQLLI TVDNGISSVD GVAAAKAAGL KVLVTDHHLP GEQLPDADAI INPNQPGCSF
PSKSLAGVGV IFYVLMALRA RLRSLGRYEA QPQPNIGELL DLVALGSVAD VVPLDANNRI
LVHQGLERIR AGRARPGLKA ILEVARRDHR RITSTDLGFI LGPRLNAAGR LDDMSLGIEC
LLCEDAALAQ DMAQQLDDLN QDRKSIEQGM QREALAQLKD LPVESMPYGL CLFDADWHQG
VIGILASRLK ERYHRPTIAF ADAGDGMLKG SARSVPGFHI RDALDAVAAR HPHLISKFGG
HAMAAGLSLP EGNFPAFAKA FDEEVRRQLR EEDLTGRLLS DGSLAVEEFH LDLAKALRHA
GPWGQHFPEP LFHGVFQLVE QRVVGERHLK VVLKSECGSV RLDGIAFGVD REVWPNPTVR
WVELAYKLDV NEFRGNESVQ LMIAHMEPR
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