Gene Pput_4240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4240 
Symbol 
ID5190540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4743949 
End bp4745373 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content65% 
IMG OID640588717 
Productgamma-aminobutyraldehyde dehydrogenase 
Protein accessionYP_001269548 
Protein GI161936354 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID[TIGR03374] 1-pyrroline dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACGC AGATGCTGAT CAATGGCCAG CTAGTCGCTG GCCAAGGCCC GGCCTGGACC 
GTGCTCAACC CGGCGCTGGG CACTGCCCTG GCGCAGATCA ACGAAGCCAC CGAGGCACAG
GTAGACAGCG CCGTACGCGC TGCCGACCAA GCCTTCGACA GCTGGTCGCA AACCAGCCCT
AAAGAACGTT CGCAGGCCTT GCTGGCGCTG GCCGACGCCA TCGAAGCCCA TGCCGATGAA
CTGGCCCGGC TGGAATCGCA GAACTGCGGC AAGCCCCTGA GCGCTGCCCT GAATGACGAG
ATCCCGGCGA TTGCCGACGT GTTCCGTTAC TTTGCCGGTG CTGCGCGCTG CCTGGGCGGC
TCGGCGGCAG GCGAGTACCT GCCGGGCCAC ACCTCGATGA TCCGGCGCGA TCCGTTGGGC
GTGGTGGCGT CCATCGCGCC GTGGAACTAC CCGCTGATGA TGCTCGCCTG GAAGATCGCC
CCGGCCCTGG CTGCCGGCAA CACGGTGGTG ATAAAACCAT CCGAACTGAC GCCACTGACG
GCCCTGCGCC TGGGCGAGCT GGCCCAGGAC TTGCTGCCGC CGGGGGTGCT GAACATTCTC
TTCGGCCGCG GCCAGACCGT CGGCAACCCG CTGGTCAGCC ATCCAAAGGT GCGCATGGTG
TCGCTGACCG GCTCGATCCC CACTGGCGCG CACATCATCA GCGCCACCGC CGACAGCGTG
AAACGCATGC ACATGGAGCT GGGCGGCAAG GCGCCGGTGC TGGTGTTCGA TGACGCAGAC
ATCGATGCCG CCATCGACGG CATCCGCACC TTCGGCTTTT ACAACGCCGG CCAGGACTGC
ACCGCAGCCT GCCGCCTGTA CGTACAGGAC GGGATCTACG AGCGCTTCGT CGAGCGCCTG
GGTGCAGCAG TGGCGAGCCT GAAACCTGGC CTGCAAGAGG CCGAGGACAC CGAGCTGGGG
CCATTGATCA GTGCCCAGCA CCGCGACAAG GTGGCCGGGC TGGTGCAGCG GGCCATCGCC
CAGCCACACA TTCGCCTGGT GACGGGTGGC AAGGCAATTG ATGGCGAGGG TTTCTACTTC
GAGCCGACCG TGCTGGCCGA CGCCCTGCAG GACGACGAGA TCGTGCGCAA CGAAGTGTTC
GGCCCGGTGG TTTCGGTCAC ACGCTTCACA GACGAAGCGC AGGCGCTGGA ATGGGCCAAC
GACTCCAACT ACGGCCTGGC CTCATCGGTA TGGACCCGCG ACACCGGCCG CGCCCACCGC
CTGGCGGCGC GCTTGCAGTA TGGCTGCACC TGGGTGAATA CCCACTTCAT GCTGGTCAGC
GAAATGCCCC ATGGCGGGCA GAAGCATTCG GGGTATGGCA AGGACATGTC GATGTATGGG
CTGGAGGACT ACACCTGTGT GCGGCATGTG ATGATCAAGC ACTAA
 
Protein sequence
MQTQMLINGQ LVAGQGPAWT VLNPALGTAL AQINEATEAQ VDSAVRAADQ AFDSWSQTSP 
KERSQALLAL ADAIEAHADE LARLESQNCG KPLSAALNDE IPAIADVFRY FAGAARCLGG
SAAGEYLPGH TSMIRRDPLG VVASIAPWNY PLMMLAWKIA PALAAGNTVV IKPSELTPLT
ALRLGELAQD LLPPGVLNIL FGRGQTVGNP LVSHPKVRMV SLTGSIPTGA HIISATADSV
KRMHMELGGK APVLVFDDAD IDAAIDGIRT FGFYNAGQDC TAACRLYVQD GIYERFVERL
GAAVASLKPG LQEAEDTELG PLISAQHRDK VAGLVQRAIA QPHIRLVTGG KAIDGEGFYF
EPTVLADALQ DDEIVRNEVF GPVVSVTRFT DEAQALEWAN DSNYGLASSV WTRDTGRAHR
LAARLQYGCT WVNTHFMLVS EMPHGGQKHS GYGKDMSMYG LEDYTCVRHV MIKH