| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4239 |
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| Symbol | |
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| ID | 5190539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4743125 |
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| End bp | 4743931 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640588716 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001269547 |
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| Protein GI | 148549445 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.326654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTCTG AAAAAGCGTC GGCAGGGCTG CGCCTGGCGG CTTGGGGCGG GTTACTGTTC
CTGCACTTCC CGATCCTGAT CATCTTCCTG TACGCCTTCA ACACCGAAGA CGCGGCGTTC
AGCTTTCCGC CCAAGGGCTT TACCCTGAAG TGGATCGACG TGGCCTTTGC CCGGCCCGAT
GTGCTCGAGG CAATCAAGCT GTCGCTGCAG GTGGCTTGCC TGGCCACTTT GATCGCACTG
GTGCTCGGTA CGCTGGCCTC GGCGGCGCTC TATCGGCGCA GCTTCTTCGG CAAGGAGAGC
ATTTCGCTGG TGCTGATCCT GCCCATTGCC CTGCCAGGCA TCATCACCGG TATCGCCCTG
CTCTCGGCGT TCAAGACGCT GGGGATAGAG CCCGGGGTGT TCACCATCGT AGTCGGCCAC
GCCACGTTCT GCGTGGTGAT CGTCTACAAC AACGTGATCG CCCGCCTGCG GCGTACCTCG
CAAAGCCTGA TCGAAGCCTC GATGGACCTT GGTGCCGACG GTTGGCAGAC CTTCCGCTAC
ATCGTCCTGC CCAACCTCGG CTCGGCGCTG CTGGCGGGCG GCATGCTGGC CTTTGCCTTG
TCGTTCGATG AAATCATCGT CACCACGTTC ACCGCCGGCC ATGAGCGCAC CCTGCCGATC
TGGCTGCTCA ACCAGCTCAG CCGCCCACGC GACGTGCCCG TGACCAACGT TGTCGCCATG
CTGGTGATGC TGGTGACCAT GCTGCCGATT CTTGGCGCCT ATTACCTGAC CCGTGGCGGA
GACAGCGTCG CGGGCGGTGG AAAATGA
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| Protein sequence | MHSEKASAGL RLAAWGGLLF LHFPILIIFL YAFNTEDAAF SFPPKGFTLK WIDVAFARPD
VLEAIKLSLQ VACLATLIAL VLGTLASAAL YRRSFFGKES ISLVLILPIA LPGIITGIAL
LSAFKTLGIE PGVFTIVVGH ATFCVVIVYN NVIARLRRTS QSLIEASMDL GADGWQTFRY
IVLPNLGSAL LAGGMLAFAL SFDEIIVTTF TAGHERTLPI WLLNQLSRPR DVPVTNVVAM
LVMLVTMLPI LGAYYLTRGG DSVAGGGK
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