| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4238 |
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| Symbol | |
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| ID | 5194747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4742224 |
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| End bp | 4743135 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640588715 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001269546 |
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| Protein GI | 148549444 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0426615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAC TGCGCGCCCT GTCCAACCTG CTGTACCGGC GCCCCAACCT GTACCTGGCA
CTGCTGTTGA TCCCGCCGCT GACCTGGTTC GGCGCGATTT ACCTGGGTTC GCTGCTGAAC
CTGCTGTGGC AGGGCTTCTA TACCTTCGAC GACTTCACCA TGGCGGTGAC CCCGGACCTG
ACCCTGGGCA ACTTCGCCGC ACTGTTCAAC CCGTCGAACT TCGACATCAT CCTGCGCACC
CTGGGCATGG CGGTGGCGGT GTCGCTGGCC AGCGCGGTAC TGGCCTTCCC CATCGCCTAT
TACATGGCGC GTTACACCAG CGGCAAGACC AAGGCGTTTT TCTACATCGC GGTGATGATG
CCGATGTGGG CCAGCTACAT CGTCAAGACC TATGCCTGGA CCCTGCTTCT GGCCAAGGGC
GGTGTGGCCC AATGGTTCGT CCAGCAGTTG CACCTGGACG GCCTGCTGCA GGCGGTGCTG
GCCTTGCCGG GCGTGGGCGG CAGCACGCTG TCGACTTCGC ACCTGGGGCG CTTCCTGGTG
TTCGTGTACA TCTGGCTGCC ATTCATGATC CTGCCGATCC AGGCCTCGCT GGAGCGCTTG
CCACCGTCGC TGCTGCAGGC TTCGGCCGAC CTGGGCGCAC GGCCGGGGCA AACCTTCGTG
CAGGTGATCC TGCCGCTGTC GATCCCCGGC ATCGCCGCCG GCTCGATCTT CACCTTCTCG
CTCACCCTGG GCGACTTCAT CGTGCCGCAG CTGGTCGGGC CGCCCGGCTA CTTCATCGGC
AGCATGGTCT ATGCCCAGCA AGGGGCGATC GGCAACATGC CGATGGCTGC CGCGTTCACC
TTGGTGCCCA TTGTGCTGAT CGCGGTATAC CTGGCCATCG TCAAGCGTCT GGGGGCCTTC
GATGCACTCT GA
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| Protein sequence | MSTLRALSNL LYRRPNLYLA LLLIPPLTWF GAIYLGSLLN LLWQGFYTFD DFTMAVTPDL
TLGNFAALFN PSNFDIILRT LGMAVAVSLA SAVLAFPIAY YMARYTSGKT KAFFYIAVMM
PMWASYIVKT YAWTLLLAKG GVAQWFVQQL HLDGLLQAVL ALPGVGGSTL STSHLGRFLV
FVYIWLPFMI LPIQASLERL PPSLLQASAD LGARPGQTFV QVILPLSIPG IAAGSIFTFS
LTLGDFIVPQ LVGPPGYFIG SMVYAQQGAI GNMPMAAAFT LVPIVLIAVY LAIVKRLGAF
DAL
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