| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4237 |
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| Symbol | |
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| ID | 5194746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4741191 |
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| End bp | 4742222 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640588714 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_001269545 |
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| Protein GI | 148549443 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.391608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTAG CCGTCCAGTT CACCCAAGTT TCCCGCACCT TCGGCGAGGT CAAGGCCGTC
GACCAGGTCA GCATCGACAT CATCGATGGC GAGTTCTTTT CCATGCTCGG CCCTTCCGGC
TCGGGCAAAA CCACCTGCCT GCGCCTGATC GCAGGCTTCG AGCAACCCTC CAGCGGCTCG
ATCCGCATCC AAGGGGTCGA GGCCGCTGGC CTGCCGCCCT ACCAACGTGA CGTCAACACA
GTGTTCCAGG ACTATGCGCT GTTCCCGCAC ATGAACGTGC TGGACAACAT CGCCTATGGC
CTGAAGGTAA AAGGCGTGGG CAAGGCCGAA CGCCACAGCC GCGCCGAAGA AGCCCTGGCC
ATGGTGGCCT TGGCCGGCTA TGGCGCGCGT AAGCCGGCAC AGCTGTCTGG CGGCCAGCGT
CAGCGCGTGG CCCTGGCCCG GGCGTTGGTC AACCGCCCAC GGGTGCTGCT GCTCGATGAG
CCACTGGGCG CGCTGGACCT GAAATTGCGC GAGCAGATGC AAGGTGAGCT GAAAAAGCTG
CAACGCCAAC TGGGCATCAC CTTCATCTTC GTCACCCACG ACCAAACCGA AGCACTGTCG
ATGTCCGACC GGGTCGCGGT GTTCAACCGC GGCCGTATCG AACAGGTCGA CACCCCGCGC
AACCTGTACA TGAAGCCCAG CACAACCTTC GTCGCTGAAT TCGTCGGCAC GTCCAACGTG
GTGCGTGGCG AGCTGGCCAT GCAGCTCAAC GGCAGCCCGG CGCCCTTCTC CATCCGTCCC
GAGCACATTC GCCTGGGCGA CCCGGTGGTG ACCAGCCATG AGGTACAGGT CAGCGGCGTG
CTGCGTGATG TCCAGTACCA AGGCAGCGCC ACACGCTACG AACTGCAGCT GGAAAACGGT
CAACTGCTGG CAGTAAGCCA GGCCAATGAC CGCTGGCAAA AGCAGGTGCA GGCCTGGCAG
CCCGGGCAAC GCCTGCAGGC GCACTGGCCC CGCGAAGCCA TGACGGTGCT GCAGGAAACC
GAGGGCCGCT GA
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| Protein sequence | MPLAVQFTQV SRTFGEVKAV DQVSIDIIDG EFFSMLGPSG SGKTTCLRLI AGFEQPSSGS
IRIQGVEAAG LPPYQRDVNT VFQDYALFPH MNVLDNIAYG LKVKGVGKAE RHSRAEEALA
MVALAGYGAR KPAQLSGGQR QRVALARALV NRPRVLLLDE PLGALDLKLR EQMQGELKKL
QRQLGITFIF VTHDQTEALS MSDRVAVFNR GRIEQVDTPR NLYMKPSTTF VAEFVGTSNV
VRGELAMQLN GSPAPFSIRP EHIRLGDPVV TSHEVQVSGV LRDVQYQGSA TRYELQLENG
QLLAVSQAND RWQKQVQAWQ PGQRLQAHWP REAMTVLQET EGR
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