Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4234 |
Symbol | |
ID | 5192354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4737199 |
End bp | 4738821 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640588711 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001269542 |
Protein GI | 148549440 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGAACT GGACCTTGCG CCAACGGATC CTGGCAAGTT TCGCCGTGAT CATCGCCATC ATGCTGCTGA TGATCGTGGC CGCCTACTCG CGGTTGGTGG CTATCGAAAC CGCCGAAGAG GCAGTGGGGA CCGACAGCAT TCCCGGCGTC TACTACAGCT CGATGATTCG CAGCGCCTGG GTCGACAGCT ACGTCACCAG CCAGCAACTG GTGGGCCTGT CCAACCATCG TGAAATCACT TCGGCCGACC TGGAACTGTT CAGAAGCTTC GATAATCGGC TGAAGCAATA CATGGCCAGC TACCAGACCA CCATCCAGGA CAAAGACGAC CAGGCCCGCT TCGACAGCTT CGTGCAACTG GAAGAAAGCT ACCTCAAGAT CGTCAAACAG GTGCTGGATG CCTACGGTCA GCGCAACTAC GACGAGGCCC AGCGGCTGAT CACCGAGGTC CTCACTCCGG CCTGGAAGGA TGGGCGCGAG CACCTGAATG AAGTGATCGA GAATAATCGG GCCTCTGCCG ATGCCGCCAC CAACGATATC GTCAACGCAG TCAACACGGC CAAGGGCAGC ATGGTGGTCT CACTGCTGCT GGCAATCGTC GCTGCCGGCA TCTGCGGCCT GTTGCTGCTG CGCGCTATCA CAGCGCCCAT GCAGCGTATC GTGCATGCCC TCGACAAGCT GCGTTCCGGT GACCTGAGCA TGCGCCTGAG CCTGGATCGC AAGGACGAAT TCGGTGCCAT CGAAAGCGGC TTCAACGAAA TGGCCGAGGC ACTGGCCAAC CTGGTGGCCC AGGCCCAACG CTCGTCGGTG CAGGTGACCA CTTCGGTCAC CGAAATTGCC GCCACGTCCA AGCAACAGCA GGCCACCGCC ACCGAGACGG CCGCCACCAC CACCGAAATT GGCGCCACCT CGCGGGAAAT CGCCGCGACT TCGCGGGACC TGGTGCGCAC CATGACCGAA GTGACGACGG CTGCTGACCA GGCATCCAGT CTGGCAGGCT CCGGGCAGCA GGGCCTGGCA CGCATGGAAG AGACCATGCA CCAAGTGATG GGCGCAGCCG ACCTGGTCAA TGCCAAGCTC GGTATCCTCA ACGAGAAAGC CAGCAACATC ACCCAGATGG TGGTAACCAT CGTCAAGGTT GCCGACCAGA CCAATCTGCT GTCGCTCAAC GCCGCCATCG AAGCGGAAAA GGCCGGTGAA TATGGCCGCG GCTTCGCCGT GGTCGCGACC GAAGTGCGCC GCCTGGCCGA CCAGACCGCC GTGGCCACCT ACGACATCGA GCAAATGGTG CGCGAGATCC AGTCGGCAGT GTCGGCCGGT GTCATGGGGA TGGACAAGTT CTCCGAAGAA GTGCGCCGCG GCATGTTCGA GGTGCAACAG GTGGGCGAGC AACTCAGCCA GATCATTCAC CAGGTGCAGG CCTTGGCGCC CCGCGTATTG ATGGTCAACG AAGGCATGCA GGCCCAGGCC ACCGGTGCCG AGCAGATCAA CCAGGCGCTG GCCCAGCTCA GCGATGCCAG CACCCAGACT GTCGAGTCGC TGCGCCAGGC CAGCTATGCC ATCGATGAGC TGAGCCAGGT GGCCGCGGGC CTGCGTGGCG GCGTGTCGCG CTTCAAAGTC TGA
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Protein sequence | MKNWTLRQRI LASFAVIIAI MLLMIVAAYS RLVAIETAEE AVGTDSIPGV YYSSMIRSAW VDSYVTSQQL VGLSNHREIT SADLELFRSF DNRLKQYMAS YQTTIQDKDD QARFDSFVQL EESYLKIVKQ VLDAYGQRNY DEAQRLITEV LTPAWKDGRE HLNEVIENNR ASADAATNDI VNAVNTAKGS MVVSLLLAIV AAGICGLLLL RAITAPMQRI VHALDKLRSG DLSMRLSLDR KDEFGAIESG FNEMAEALAN LVAQAQRSSV QVTTSVTEIA ATSKQQQATA TETAATTTEI GATSREIAAT SRDLVRTMTE VTTAADQASS LAGSGQQGLA RMEETMHQVM GAADLVNAKL GILNEKASNI TQMVVTIVKV ADQTNLLSLN AAIEAEKAGE YGRGFAVVAT EVRRLADQTA VATYDIEQMV REIQSAVSAG VMGMDKFSEE VRRGMFEVQQ VGEQLSQIIH QVQALAPRVL MVNEGMQAQA TGAEQINQAL AQLSDASTQT VESLRQASYA IDELSQVAAG LRGGVSRFKV
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