Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4230 |
Symbol | |
ID | 5195405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4732460 |
End bp | 4734757 |
Gene Length | 2298 bp |
Protein Length | 765 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640588707 |
Product | CheA signal transduction histidine kinase |
Protein accession | YP_001269538 |
Protein GI | 148549436 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCAG AGCAAATGCG CGACGCATCG TTGCTCGAAC TGTTCAGCCT GGAGGCCGAG GCGCAGACCC AAGTGCTCAG TGCCGGCCTG ATGGCACTGG AGCGCAACCC CACCCAGGCC GACCAGCTCG AGGCTTGCAT GCGCGCTGCC CACTCGCTCA AGGGGGCAGC GCGCATTGTC GGGGTGGATG CTGGTGTCAG TGTCGCCCAC GTGATGGAAG ACTGCCTGGT GGCGGCCCAG GAAGGCCGAC TACGGCTGAC CGCCGAGCAT ATTGACGCGC TGTTGCAAGG TACCGACCTG TTGATGCGTA TTGCCACCCC CGGCGATGCC GGTGCGCAGG CGACCTTGCC GGTGTTTCTT GCGCAAATGG CCAGCCTGCT CGACCCGGGC GCCTCTGCCA TGCCTGTCGT GCCGCTGGCT GCATCCGTGC CGCCGGAGCC GCCGCTGGCA ACCCTGCCGC CTGCACCTAG GGTAATGCCA GCCGAACCGC CGGAACCAGA GCCCGAACCC GCCCTGCGGC GCAAGGCTGG CAAGCGCGCT GGCGAAGGTG CCGAGCGGGT ACTGCGTGTT ACCGCCGACC GCCTTAATAG CCTGCTTGAC CTGTCCAGCA AGTCGCTGGT GGAAACCCAG CGGCTCAAGC CATACCTGGC TACCCTGCAG CGCCTCAAGC GCATGCACGG GCAAGGTATG CAGGCGCTTG ACGGCTTGCG CATGCAGCTG GAAGACACGG GGCAGGGCAA CGAGGTGCTC GAAGCCTTGG CACAGACCCA GCGCCTGCTG GCAGAAACCC AGCAGATTCT GCAGCAGCAG GCGGCCGACC TGGATGAGTT CGGCTGGCAG GCCAGTCAGC GTGCGCAGTT GTTGTATGAC ACCGCCCTGG CCTGCCGGAT GCGGCCGTTT GCCGACGTGC TGACCGGGCA AAGCCGCATG GTCCGCGACC TGGGCCGTTC GCTGGGCAAG CCGGTGCGGC TGGTGGTGGA AGGGGAGAAG ACCCAGGTTG ACCGCGATGT GCTGGAAAAG CTCGAAGCAC CGCTGACCCA CCTGTTGCGC AATGCCGTCG ACCACGGCAT CGAGTTGCCC GAGCGGCGCT TGCTGGCGGG CAAGCCGGAC GAGGGGGTGA TCCGCCTGCG GGCTTCGCAC CAGGCGGGCA TGCTCAGCCT GGAACTGATC GACGATGGCG CCGGTATCGA CCTGGAGCGC CTGCGCAGCA GCATCGTCGA GCGCGCCCTG TCGCCCGCTG ACACGGTGAC GCGGATGAGT GAGGCGGAGC TGCTGACGTT CCTGTTCCTG CCCGGTTTCA GCCTGCGTGA CAAGGTTACC GAAGTGTCCG GGCGCGGTGT GGGGCTGGAT GCGGTGCAGC ACTTGATCCG CGAGCTGCGC GGCTCGATCG AATTGACCCA GGTGGCAGGG CAGGGCTGTC GCTTCCATCT TCAGGTGCCG CTGACCCTGT CGGTCGTTCG CAGCCTGGTG GTCGAGGTGG GCGGGGAGGC TTACGCTTTC CCGCTGGCGC ATATCGAACG CACGCTGGAA GTGACCGCCG AGCAGATCGT GCAGATCGAA GGCCGCCAGC ACTTCTGGCA CGAAGGCCGG CATATTGGCC TGGTGGCGGC CAGCCAGTTG CTCAATCGCC CGGCGGGGCA AAGCGACGAA GCCAGCTTGC GGGTAGTGGT GATTCGTGAG CGCGAGCAGC TGTACGGGGT GGCCGTAGAG CGGTTGGTGG GGGAACGGGT GCTGGTCGTG ATGCCGCTCG ACCCACGCCT GGGGAAGGTG CAGGACATTT CCTCCGGCGC CTTGCTCGAT GATGGCTCGG TGGTCCTGAT TGTCGATGTC GAAGACTTGC TACGCTCGGT GGAAAAACTG CTCAGCACCG GCAGCCTGGA ACGCATCGAA CGCGGCAGCA GCGGAGCCCG TGGCGCTGTC CGCAAACGCA TCCTGGTGGT CGATGACTCG CTGACCGTGC GCGAACTGCA GCGCAAACTG CTGGGCAACC GTGGCTACGA CGTGGCAGTG GCGGTGGATG GCATGGACGG CTGGAACGCC CTGCGCAGTG AGGACTTCGA CCTGCTGATC ACCGACATCG ACATGCCGCG CATGGACGGT ATCGAGCTGG TTACCCTGGT GCGTCGCGAC CAGCGTCTGC AGTCATTGCC GGTGATGGTG GTGTCCTATA AAGACCGTGA GGAAGACCGA CGGCGTGGCC TGGACGCCGG CGCCGACTAC TATTTGGCAA AGGCCAGTTT CCACGACGAT GCGTTGCTGG ATGCTGTTGT GGAACTGATC GGAGGTGCTC AGGGATGA
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Protein sequence | MTPEQMRDAS LLELFSLEAE AQTQVLSAGL MALERNPTQA DQLEACMRAA HSLKGAARIV GVDAGVSVAH VMEDCLVAAQ EGRLRLTAEH IDALLQGTDL LMRIATPGDA GAQATLPVFL AQMASLLDPG ASAMPVVPLA ASVPPEPPLA TLPPAPRVMP AEPPEPEPEP ALRRKAGKRA GEGAERVLRV TADRLNSLLD LSSKSLVETQ RLKPYLATLQ RLKRMHGQGM QALDGLRMQL EDTGQGNEVL EALAQTQRLL AETQQILQQQ AADLDEFGWQ ASQRAQLLYD TALACRMRPF ADVLTGQSRM VRDLGRSLGK PVRLVVEGEK TQVDRDVLEK LEAPLTHLLR NAVDHGIELP ERRLLAGKPD EGVIRLRASH QAGMLSLELI DDGAGIDLER LRSSIVERAL SPADTVTRMS EAELLTFLFL PGFSLRDKVT EVSGRGVGLD AVQHLIRELR GSIELTQVAG QGCRFHLQVP LTLSVVRSLV VEVGGEAYAF PLAHIERTLE VTAEQIVQIE GRQHFWHEGR HIGLVAASQL LNRPAGQSDE ASLRVVVIRE REQLYGVAVE RLVGERVLVV MPLDPRLGKV QDISSGALLD DGSVVLIVDV EDLLRSVEKL LSTGSLERIE RGSSGARGAV RKRILVVDDS LTVRELQRKL LGNRGYDVAV AVDGMDGWNA LRSEDFDLLI TDIDMPRMDG IELVTLVRRD QRLQSLPVMV VSYKDREEDR RRGLDAGADY YLAKASFHDD ALLDAVVELI GGAQG
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