Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4211 |
Symbol | |
ID | 5194293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4713829 |
End bp | 4714518 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640588688 |
Product | extensin family protein |
Protein accession | YP_001269519 |
Protein GI | 148549417 |
COG category | [S] Function unknown |
COG ID | [COG3921] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.535482 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGCAT TGCTGGCGCT ACTGGCCGGC CTGCTGACGG TGGCCGGCCT GGCCTGGCAC TTCGGCTGGC GCCTACCTGC CGCATGGAAC CCCTGGGCGC CGCTGGACGT ACGCCAGCCG CCCAACCTGC TGACCCCCTA CAAACTGTCG CGCCTGCGCG ATGACCCAGC GCTGTGCCGG CAGGCGCTGG AAACCAGCCA CCTGCGTTAC CGGGCACAAG CCGACAGCCC GGCGTCGGCC AACTGCCCGC TGCAGAACGT ATGGCGCATT GAGGGCGGCC AGGCGCGGTT GGGCAGCAGC TTTCTGGCCA GTTGCCCGTT GGCGGTGGCC TATGCACTGT TCGAAAACCA TGGCTTGCAG CCGGCGGCGC AGGAAGTGTT TGGGCAAGCG GTGACGCAGG TCGATCACCT GGGCAGCTTT GCCTGCCGCA ACGTCTACCA CCGCAAGCAG GGCCGTTTGA GCCAGCACGC TACGGCCAAT GCGCTGGACA TCAGCGGATT TCGCCTGAAG GACGGCCAGC GCATTATTCT GGCGCGTGAC TGGCAGGCGG GCGGGCAGAA GGCGGAATTC CTGCACCGGG TGCAGCGGGC AGCTTGCGAG AGCTTCAGCA CGGTACTGGG GCCGGACTAC AACGCTGCGC ACCGCAACCA CTTCCATCTG GACATGGGGC GCTGGCAGAT CTGTCGTTAG
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Protein sequence | MRALLALLAG LLTVAGLAWH FGWRLPAAWN PWAPLDVRQP PNLLTPYKLS RLRDDPALCR QALETSHLRY RAQADSPASA NCPLQNVWRI EGGQARLGSS FLASCPLAVA YALFENHGLQ PAAQEVFGQA VTQVDHLGSF ACRNVYHRKQ GRLSQHATAN ALDISGFRLK DGQRIILARD WQAGGQKAEF LHRVQRAACE SFSTVLGPDY NAAHRNHFHL DMGRWQICR
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