Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4205 |
Symbol | |
ID | 5192677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 4706192 |
End bp | 4706878 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640588682 |
Product | hypothetical protein |
Protein accession | YP_001269513 |
Protein GI | 148549411 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.414733 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGCA CTTCCCTGCG CTTCACCACC CTGTGCGCCG GCCTGCTGCT GTCGGCCAGT GCCCTGGCAC TGTCGCTGGG CGACCTCAGC CAGAAAGACG CCACCGGCGG CCTGAAAGAT GCCCTGACCC AAGGTGCGCA GCTGGCCGTC AAGCAACTGA GCACCCCAGG CGGCTTCAGC AACAACCCGG ACGTGCGCAT CGAGCTGCCA GGCAACCTGG GCAAAGCCGC CAAGGCGATG AAGATGTTCG GCAAGGGTGA ACAGGTCGAA GCCCTGGAAA CCAGCATGAA CAAGGCCGCC GAGGCCGCCG TGCCGCAGAC CCAGGCGATT CTGGTGGATG CCGTCAAGAA CATGAGCGTG ACCGATGCCA AAGGCATCCT CAGCGGCGGT GACGACTCGG CCACCCAGTA CCTGAACAAA AGCAGCCGCG AGCAGATCCG CGCCAAGTTC CTGCCAATCG TCAAGCAGGC CACCGACAAG GTTGGCGTGG CCCAGCAGTA CAATGCCTTC GCCGCCCAGG CCAAAGGCCT GGGGCTGGTC AAGGATGACG CCAATATCGA GAACTACGTG ACCGAGAAGG CGCTGGATGG CTTGTTCGAG ATGATCGGCA AAGAGGAGCA GAGCATTCGC CAGAACCCGG CAGCTGCGGC TACCAGCCTG GCCAAGAAGG TCTTCGGCGC GCTGTAG
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Protein sequence | MIRTSLRFTT LCAGLLLSAS ALALSLGDLS QKDATGGLKD ALTQGAQLAV KQLSTPGGFS NNPDVRIELP GNLGKAAKAM KMFGKGEQVE ALETSMNKAA EAAVPQTQAI LVDAVKNMSV TDAKGILSGG DDSATQYLNK SSREQIRAKF LPIVKQATDK VGVAQQYNAF AAQAKGLGLV KDDANIENYV TEKALDGLFE MIGKEEQSIR QNPAAAATSL AKKVFGAL
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