| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4204 |
|---|
| Symbol | |
|---|
| ID | 5192555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 4705760 |
|---|
| End bp | 4706158 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640588681 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001269512 |
|---|
| Protein GI | 148549410 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3126] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.40853 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGC TCTTTATGCT GTGTTGCGCA TCCCTGCTTG CAGCCTGCTC CAGCCAAACC
CCACCCAACC AGGCCAGCCT GGACGGTGAA GTCTTCTACC TGCAGCGCAT TGCCCTGCCG
CCTGCCGCCA CCCTGAGCGT GGAACTGCAG GATGTGTCGC TGATGGACGC CCCTGCCGTG
ACCCTGGCGC GCCAGGCCGG CCCGGTCAAA GGCAACGTGC CGCTGCCGTT CCATCTCACC
TATGACCCCG CGCAGGTCAA GCCTGGCCAC CGCTATGCGG TGAGCGCGCG CATCGAGCTG
AATGGCAAGT TGCTGTTCAT CAATACCGAA CACCACGGTG TCGCGCTTGA TGGCAGTGAC
CCGCAATCGG TACGCATCAA GGTAGATCAG GTTCGCTGA
|
|---|
| Protein sequence | MKKLFMLCCA SLLAACSSQT PPNQASLDGE VFYLQRIALP PAATLSVELQ DVSLMDAPAV
TLARQAGPVK GNVPLPFHLT YDPAQVKPGH RYAVSARIEL NGKLLFINTE HHGVALDGSD
PQSVRIKVDQ VR
|
|---|
| |