Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4198 |
Symbol | |
ID | 5192991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 4697491 |
End bp | 4700082 |
Gene Length | 2592 bp |
Protein Length | 863 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640588675 |
Product | glycosyl transferase family protein |
Protein accession | YP_001269506 |
Protein GI | 148549404 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG5309] Exo-beta-1,3-glucanase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.80228 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.702129 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTCAC GTAAATTCGG CCTGAACCTG GTAGTGGTGC TGGCCATCGC CGCACTGTTC ACCGGGTTCT GGGCACTGAT CAACCGCCCG GTCTCCGCCC CCGCCTGGCC AGAACAGATC TCTGGCTTTT CGTATTCGCC GTTCCGCCTG GGCGAAAGCC CACAGAAGGG TCAGTACCCC ACCGACGACG AAATGCGTCA GGACCTGGAG CAACTGAGCA AACTGACCGA CAGCATCCGT ATCTATACCG TGGAAGGCAC CCAGGCCGAC GTCCCGCGCC TGGCCGAGGA GTTCGGCCTG CGGGTGACGC TGGGGATATG GATCAGCCCG GACCTGGAGC GCAACGAGCG CGAAATCGCC ACGGCCATCC AGCTGGCCAA CACGTCGCGC AGCGTGGTGC GGGTGGTGGT CGGCAACGAG GCGCTGTTCC GTGAAGAAGT CACACCGGAA AACCTGATCA AATACCTGGA CCGCGTACGC GCAGCCGTGA AGGTGCCCGT GACCACCAGT GAACAATGGC ACATCTGGAA GGAACATCCT GAGCTGGCCA GGCACGTCGA CCTGATTGCC GCGCACATCC TGCCCTACTG GGAGTTCGTG CCGATGAAGG ATTCGGTCGA GTTCGTCCTC GACCGCGCCC GTGAACTGAA GCACCAGTTC CCGCGCAAAC CCCTGCTGCT GTCGGAAGTC GGCTGGCCGA GCAACGGCCG CATGCGCGGT GGTGCCGATG CCACACAGGC CGACCAGGCC ATCTACTTGC GCACCCTGGT CAATACCCTC AACCGCCGTG GCTACAACTA CTTTGTCATT GAAGCCTATG ACCAACCCTG GAAGGCCAGC GACGAAGGGT CGGTAGGCGC CTACTGGGGC GTCTACAACG CCGAGCGCCA GCAGAAGTTC AACTTCGACG GCCCTGTGGT GGCGATCCCG CAGTGGCGGG CCCTGGCAGT GGCGTCGGTG GTGCTGGCAA TGATCGCCCT GATGGTGCTG TTCATCGATG GCTCGGCCCT GCGCCAGCGT GGCCGTACCT TCCTGACGTT CATCACCTTC CTGTGCGGGT CGGTACTGGT GTGGATCGCC TATGACTACA GCCAGCAATA CAGCACCTGG TTCAGCCTGA CCGTGGGCGT GCTGCTGGCC CTCGGCGCGC TGGGCGTGTT CATCGTGCTG CTCACCGAGG CCCACGAACT GGCCGAGGCG GTCTGGATAC ACAAGCGCCG ACGCGAATTC CTGCCCGTGC AGGCCGACAG TGCCTACCGG CCCAAGGTGT CGGTGCATGT GCCGTGCTAC AACGAACCAC CTGAGATGGT AAAACAGACC CTGGACGCCC TGGCCGCCCT GGACTACCCC GACTACGAAG TGCTGGTGAT CGACAACAAC ACCAAGGACC CGGCCGTGTG GGAGCCACTC AAGGCCCACT GCGAGAAGCT TGGCGAGCGC TTCAAGTTCT TCCACGTCGC GCCGCTGGCC GGCTTCAAGG GCGGTGCGTT GAACTACCTG ATCCCGCACA CGGCAAAGGA CGCCGAAGTG ATCGCGGTTA TCGACTCGGA CTACTGCGTG GACCGCAACT GGCTCAAGCA CATGGTGCCG CACTTCGCCG ACCCGAAAAT TGCCGTGGTG CAGTCACCGC AGGATTACCG CGACCAGCAC GAAAGCGCCT TCAAGAAGCT GTGCTACAGC GAATACAAAG GCTTCTTCCA CATCGGTATG GTTACCCGCA ACGACCGTGA CGCGATCATC CAGCACGGCA CCATGACCAT GACCCGGCGC AGCGTGCTGG AAGAACTGGG CTGGGCCGAG TGGTGCATCT GCGAGGACGC CGAACTGGGC CTGCGTGTGT TCGAGAAAGG CCTGTCCGCC GCCTACGCCC ACAACAGCTA CGGCAAGGGC CTGATGCCCG ACACCTTCAT CGACTTCAAG AAGCAACGCT TCCGCTGGGC CTACGGCGCC ATCCAGATCA TCAAGCACCA CGCCGGCGCG CTGCTGCGCG GCAAAGGCAG CCAGCTGACC CGTGGCCAGC GCTACCACTT CCTGGCCGGC TGGCTACCGT GGATCGCCGA TGGCATGAAC ATCTTCTTCA CCATCGGCGC GCTGTTGTGG TCGGCGGCGA TGATCATCGT GCCGCATCGG GTCGATCCGC CCCTGATGAT CTTCGCCATC CCGCCGCTGG CGCTGTTCTT CTTCAAGGTC GGCAAGATCA TCTTCCTGTA CCGCCGAGCG GTGGGGGTGA ACCTCAAGGA TGCCTTCGCA GCTGCGCTGG CCGGGCTGGC GCTGTCGCAC ACCATCGCCA AGGCGGTACT GTATGGTTTC TTCACCAGCA GCATGCCGTT CTTCCGCACA CCGAAGAACG CTGACAGCCA TGGGTTGCTG GTGGCGATTT CCGAAGCCCG TGAAGAGCTG TTCATCATGT TGCTGCTGTG GGGCGCGGCG CTGGGCATCT ACCTGGTTCA GGGGCTGCCG AGCTCGGACA TGCGCTTCTG GGTGGCGATG TTGCTGGTGC AGTCGTTGCC TTATGTGGCA GCGCTGGTGA TGGCGTTCCT GTCGTCGCTG CCCAAGCCCG CAGAAAAGGC TGCCCAAGCG CAGCAGGCTT GA
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Protein sequence | MSSRKFGLNL VVVLAIAALF TGFWALINRP VSAPAWPEQI SGFSYSPFRL GESPQKGQYP TDDEMRQDLE QLSKLTDSIR IYTVEGTQAD VPRLAEEFGL RVTLGIWISP DLERNEREIA TAIQLANTSR SVVRVVVGNE ALFREEVTPE NLIKYLDRVR AAVKVPVTTS EQWHIWKEHP ELARHVDLIA AHILPYWEFV PMKDSVEFVL DRARELKHQF PRKPLLLSEV GWPSNGRMRG GADATQADQA IYLRTLVNTL NRRGYNYFVI EAYDQPWKAS DEGSVGAYWG VYNAERQQKF NFDGPVVAIP QWRALAVASV VLAMIALMVL FIDGSALRQR GRTFLTFITF LCGSVLVWIA YDYSQQYSTW FSLTVGVLLA LGALGVFIVL LTEAHELAEA VWIHKRRREF LPVQADSAYR PKVSVHVPCY NEPPEMVKQT LDALAALDYP DYEVLVIDNN TKDPAVWEPL KAHCEKLGER FKFFHVAPLA GFKGGALNYL IPHTAKDAEV IAVIDSDYCV DRNWLKHMVP HFADPKIAVV QSPQDYRDQH ESAFKKLCYS EYKGFFHIGM VTRNDRDAII QHGTMTMTRR SVLEELGWAE WCICEDAELG LRVFEKGLSA AYAHNSYGKG LMPDTFIDFK KQRFRWAYGA IQIIKHHAGA LLRGKGSQLT RGQRYHFLAG WLPWIADGMN IFFTIGALLW SAAMIIVPHR VDPPLMIFAI PPLALFFFKV GKIIFLYRRA VGVNLKDAFA AALAGLALSH TIAKAVLYGF FTSSMPFFRT PKNADSHGLL VAISEAREEL FIMLLLWGAA LGIYLVQGLP SSDMRFWVAM LLVQSLPYVA ALVMAFLSSL PKPAEKAAQA QQA
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