| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4188 |
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| Symbol | glnD |
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| ID | 5192565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4686702 |
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| End bp | 4689404 |
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| Gene Length | 2703 bp |
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| Protein Length | 900 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640588665 |
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| Product | PII uridylyl-transferase |
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| Protein accession | YP_001269496 |
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| Protein GI | 148549394 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2844] UTP:GlnB (protein PII) uridylyltransferase |
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| TIGRFAM ID | [TIGR01693] [Protein-PII] uridylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.445496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCAGG TGGACCCCGA GCTGTTCGAC CGTGGCCAGT TCCAGGCGGA ACTGGCCCTC
AAGGCGAGCC CCATCGCCGC CTTCAAGAAA GCCATCCGCC TGGCCGGCGA GGTGCTCGAC
AAACGTTTTA GCGCCGGCAG CGACATCCGC CCGCTGATCG AGGCCCGCGC CTGGCTCGTC
GACAATATCC TGCAACAGGC GTGGAACCAG TTCGACTGGG GCGACCAGAG CGGCATCGCC
CTGGTTGCGG TGGGCGGCTA CGGGCGCGGT GAACTGCACC CGCACTCGGA CATCGACCTG
CTGATTCTGC TGGGCGCTGC CGAGCACGAG CAGTACCGCG ACGCCATCGA GCGCTTTCTG
ACCTTGCTGT GGGACATTGG CCTGGAAGTC GGCCAGAGCG TGCGCACCGT AGACGAGTGC
GCCGAACAGG CCCGCGCCGA CCTGACGGTA ATCACCAACC TGATGGAAAG CCGCACCATC
GCCGGCCCCG AGGCCTTGCG TCAGCGCATG CTGGAAGTCA CCAGCACCGC GCACATGTGG
CCGAGCAAGG AGTTCTTCCT GGCCAAGCGC GCCGAACTCA AGGCCCGCCA CCACAAGTAC
AACGACACGG AGTACAACCT CGAACCCAAC GTCAAGGGTT CGCCAGGTGG CCTGCGTGAC
ATCCAGACGG TCCTTTGGGT GGCCCGCCGC CAGTACGGGA CGCTCAACCT GCATGCACTG
GCCGGCGAAG GCTTCTTGCT GGAAAGCGAG AATGAACTGC TGGCTTCGTC CCAGGACTTC
CTCTGGAAAG TCCGTTATGC CCTGCACATG CTGGCCGGAC GCGCCGAAGA CCGCCTGCTG
TTCGACCACC AGCGCAGCAT CGCCACGCTG CTGGGCTACA GCGATGAAAA CCCCAAGCGG
GCGATCGAAC AATTCATGCA GCAGTACTAC CGGGTGGTGA TGAGCATCAG CCAACTGTGC
GACCTGATCA TCCAGCACTT CGAAGAGGTT ATCCTCGCCG ATGAGGAAAG TGGCAGCACC
CAGCCGCTGA ACGCGCGGTT CCGCCTGCAT GACGGCTACA TCGAGGCCGC CCATCCGAAC
GTGTTCAAAC GCACGCCATT CGCCATGCTG GAAATCTTCG TGCTGATGGC CCAACACCCC
GAGATCAAGG GCGTGCGTGC CGATACCGTG CGCCTGCTGC GCGAACACCG CCACCTGATC
GACGACACGT TCCGCACCGA TATCCGCAAT ACCAGCCTGT TCATCGAGCT GTTCAAGTGC
GAAATCGGCA TCCACCGCAA CCTGCGCCGG ATGAACCGCT ACGGCATTCT TGGCCGTTAC
CTGCCAGAGT TCGGCCTGAT CGTCGGGCAG ATGCAGCATG ACCTGTTCCA CATCTATACG
GTCGACGCGC ATACCCTCAA CCTCATCAAG CACCTGCGCA AGCTGCAATA CACGCCGGTG
TCCGAGAAAT TCCCGCTGGC CAGCAAGCTC ATGGGACGCC TGCCCAAACC CGAGCTGATC
TACCTGGCTG GGCTGTACCA CGACATTGGC AAGGGTCGCC AGGGCGACCA CTCGGAAATC
GGTGCAGTGG ACGCGCAGAA GTTCTGCGAA CGGCACCAGT TGCCGGCCTG GGACAGCCGC
CTGATCGTCT GGTTGGTGCA GAACCACCTG GTGATGTCGA CCACCGCTCA GCGCAAGGAC
TTGTCCGACC CGCAGGTGAT CAACGACTTT GCCCTGCACG TGGGCGACGA GACGCGCCTT
GACTACCTGT ACGTACTGAC CGTGGCCGAC ATCAACGCCA CCAACCCGAG CCTGTGGAAC
TCGTGGCGGG CCAGCCTGCT GCGCCAGCTG TACACCGAAA CCAAGCGCGC CCTGCGCCGC
GGCCTGGAAA ACCCGCTGGA CCGCGAAGAG CAGATTCGCC AGACCCAGTC GTCAGCGCTG
GATATCCTGG TGCGCGAGGG CACCGACCCG GATGACGTCG AGCAGCTATG GGCGCAACTG
GGCGATGACT ATTTCCTCAA GCACACGGCC GCCGACGTGG CTTGGCACAC GGATGCGATC
CTGCAGCAAC CGGCCGATGG CGGGCCGCTG GTGCTGATCA AGGAAACCAC CCAGCGCGAG
TTCGAAGGCG GCACGCAGAT CTTCATCTAT GCCCCCGACC AGCACGATTT CTTCGCCGTG
ACGGTGGCGG CCATGTCGCA GTTGAACCTG AACATCCACG ACGCACGAAT CATCACGTCG
AGCAGCCAGT TCACCCTCGA CACCTATATT GTGCTGGACA ACGACGGCGG CTCGATCGGC
GACAACCCGC AGCGGGTCAA GCAGATTCGC GACGGCCTGA CAGAAGCGCT GCGCAACCCC
GAGGACTACC CGACCATCAT CCAGCGCCGG GTGCCGCGGC AGCTCAAGCA CTTCGACTTC
CCGCCGCAAG TGACCATCCT CAACGATGCC CAGCGGCCGG TGACCATCCT CGAAATCACC
GCGCCAGACC GCCCAGGCCT GCTGGCCCGG CTGGGGCGGA TCTTCCTGGA GTTCGACCTG
TCACTGCAAA ACGCCAAGAT CGCCACCCTC GGTGAGCGGG TAGAAGACGT GTTCTTCATT
ACCGATGCCG ACAACCAGCC GCTGTCAGAC CCGCAGCTGT GCAGCCGCCT GCAGGAAGCC
ATCGTGCAGC AACTGCAGGC CGGTCAAGGT AGCGACACCA GCCAGACCCG CGTGACCTTT
TAA
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| Protein sequence | MPQVDPELFD RGQFQAELAL KASPIAAFKK AIRLAGEVLD KRFSAGSDIR PLIEARAWLV
DNILQQAWNQ FDWGDQSGIA LVAVGGYGRG ELHPHSDIDL LILLGAAEHE QYRDAIERFL
TLLWDIGLEV GQSVRTVDEC AEQARADLTV ITNLMESRTI AGPEALRQRM LEVTSTAHMW
PSKEFFLAKR AELKARHHKY NDTEYNLEPN VKGSPGGLRD IQTVLWVARR QYGTLNLHAL
AGEGFLLESE NELLASSQDF LWKVRYALHM LAGRAEDRLL FDHQRSIATL LGYSDENPKR
AIEQFMQQYY RVVMSISQLC DLIIQHFEEV ILADEESGST QPLNARFRLH DGYIEAAHPN
VFKRTPFAML EIFVLMAQHP EIKGVRADTV RLLREHRHLI DDTFRTDIRN TSLFIELFKC
EIGIHRNLRR MNRYGILGRY LPEFGLIVGQ MQHDLFHIYT VDAHTLNLIK HLRKLQYTPV
SEKFPLASKL MGRLPKPELI YLAGLYHDIG KGRQGDHSEI GAVDAQKFCE RHQLPAWDSR
LIVWLVQNHL VMSTTAQRKD LSDPQVINDF ALHVGDETRL DYLYVLTVAD INATNPSLWN
SWRASLLRQL YTETKRALRR GLENPLDREE QIRQTQSSAL DILVREGTDP DDVEQLWAQL
GDDYFLKHTA ADVAWHTDAI LQQPADGGPL VLIKETTQRE FEGGTQIFIY APDQHDFFAV
TVAAMSQLNL NIHDARIITS SSQFTLDTYI VLDNDGGSIG DNPQRVKQIR DGLTEALRNP
EDYPTIIQRR VPRQLKHFDF PPQVTILNDA QRPVTILEIT APDRPGLLAR LGRIFLEFDL
SLQNAKIATL GERVEDVFFI TDADNQPLSD PQLCSRLQEA IVQQLQAGQG SDTSQTRVTF
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