| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4185 |
|---|
| Symbol | tsf |
|---|
| ID | 5192208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 4683745 |
|---|
| End bp | 4684608 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640588662 |
|---|
| Product | elongation factor Ts |
|---|
| Protein accession | YP_001269493 |
|---|
| Protein GI | 148549391 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0264] Translation elongation factor Ts |
|---|
| TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCAA TTACTGCAGC GCTGGTAAAA GAACTGCGCG AGCGTACCGG CGAAGGCATG
ATGGATTGCA AAAAGGCCCT GGAAAAGGCC GGCGGCGACA TCGAGAAAGC CATTGACGAC
ATGCGTGCCT CGGGCGCCAT CAAGGCCGCC AAAAAGGCTG GCAACGTCGC TGCTGAAGGC
GCTATCGCCG TCAAGACCGA CGGTACATCC GCCGTCCTGC TGGAAGTGAA CTCGCAGACC
GACTTCCTGG CCCTGCAAGA CGACTTCAAG AACTTCGTGG CCGAAAGCCT CGAAGAAGCC
TTCGCCCAGA AGCTGACCGA CGCCGCTCCG CTGATCGCCT CGCGTGAAGC TGCTCGTGAA
GCCCTGGTTG CCAAGTGCGG CGAGAACGTC AACATCCGTC GCCTGGTGCG CGTTGAGGGT
GACGTTGTCG GTGCCTACCT GCACGGCAAC AAGATCGGCG CTGTCGTCGT TCTGAAAGGC
GGTGACGTGG AGCTGGCGAA GAACATCGCC ATGCACGTTG CGGCTTCGAA CCCTGAGTTC
CTGGATTCGT CGGAAATCTC CGCCGAGGCC ATCGAGCGCG AGAAGAATGT CTTCCTGCAG
CTGAACGCCG ACAAGATCGC CGGCAAGCCG GAAAACATCG TTGAGAACAT GATCAACGGT
CGTATCACCA AGTTCAAAGC CGAAGCCTCG CTGAAAGAGC AAGCCTTCGT CATGAACCCG
GAAGTCAAGG TTGGCGAGCT GGCCAAGAAA GCCGGTGCTG AAATCGTTTC CTTCACCTAC
TTCAAAGTAG GCGAAGGCAT CGAGAAGCCA GTCGACGACT TCGCTGCTGA AGTTGCCGCT
CAGGTCGCTG CTGCCAAGCA GTAA
|
|---|
| Protein sequence | MAAITAALVK ELRERTGEGM MDCKKALEKA GGDIEKAIDD MRASGAIKAA KKAGNVAAEG
AIAVKTDGTS AVLLEVNSQT DFLALQDDFK NFVAESLEEA FAQKLTDAAP LIASREAARE
ALVAKCGENV NIRRLVRVEG DVVGAYLHGN KIGAVVVLKG GDVELAKNIA MHVAASNPEF
LDSSEISAEA IEREKNVFLQ LNADKIAGKP ENIVENMING RITKFKAEAS LKEQAFVMNP
EVKVGELAKK AGAEIVSFTY FKVGEGIEKP VDDFAAEVAA QVAAAKQ
|
|---|
| |