Gene Pput_4183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4183 
Symbolfrr 
ID5191514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4682266 
End bp4682823 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content61% 
IMG OID640588660 
Productribosome recycling factor 
Protein accessionYP_001269491 
Protein GI148549389 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0233] Ribosome recycling factor 
TIGRFAM ID[TIGR00496] ribosome recycling factor 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAACG ACATCAAGAA AGACGCGCAG GAGCGCATGG GCAAGTCCAT CGAGGCCCTG 
TCCCGCAACC TGGCTGCAAT CCGCACCGGT CGCGCTCACC CAAGCATCCT GGACAGCGTC
AAGGTTACCG CCTGGGGCAG CGAAATGCCG CTGAACCAGG TCGCCGCGAT CACCGTCGAA
GATGCCCGCA CCCTGAAGAT CGTCGCTCAC GACAAGAACC TCAGCGCTGC CATCGAAAAG
GCCATCCTCA CCTCCGATCT GGGCCTTAAC CCGTCCAGCG CCGGTACCAC CATCCGTGTC
CCGATGCCGG CCCTGACCGA GGAAACCCGC AAGGGCTACA CCAAGCAGGC CAGCGGTGTT
GCCGAGGATG CCAAGGTAGC CGTGCGCAAC GTGCGCCGCG ACGCCCTGGC TGACCTGAAA
AAGCTGACCA AGGACAAGGA AATCAGCGAA GACGAAGAGC GTCGCGCCGC GGACGAGATC
CAGAAGCTGA CTGACAAGTT CGTCGCCGAA GTCGATGCTG CCTTCAAAGC CAAGGAAAAG
GACCTGATGG CCGTCTAA
 
Protein sequence
MINDIKKDAQ ERMGKSIEAL SRNLAAIRTG RAHPSILDSV KVTAWGSEMP LNQVAAITVE 
DARTLKIVAH DKNLSAAIEK AILTSDLGLN PSSAGTTIRV PMPALTEETR KGYTKQASGV
AEDAKVAVRN VRRDALADLK KLTKDKEISE DEERRAADEI QKLTDKFVAE VDAAFKAKEK
DLMAV