Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4173 |
Symbol | lpxB |
ID | 5193276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4671572 |
End bp | 4672699 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640588650 |
Product | lipid-A-disaccharide synthase |
Protein accession | YP_001269481 |
Protein GI | 148549379 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0763] Lipid A disaccharide synthetase |
TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCAGC TTTGCGTAGC GCTGGTCGCG GGTGAGGCCA GTGGCGATAT TCTTGGTTCA GGCTTGATGC GTGCCCTCAA GGCACGCCAC CCCGACGTGC GGTTCATCGG GGTTGGCGGC CCCTTGATGG AAGCTGAGGG CCTGCAATCC TATTTCCCCA TGGAGCGCCT GGCCGTCATG GGGCTGGTCG AGGTACTCGG GCGTCTGCGC GAGCTGCTCA AGCGCCGCAA GTTGCTGATC CAGACCCTGA TCGAAGAAAA GCCCGACGTA TTCATCGGCA TCGACGCCCC TGACTTCACC CTCAACATCG AACTGAAGCT GCGCCAGGCC GGGATCAAGA CCGTGCACTA TGTCAGCCCG TCAGTGTGGG CCTGGCGGCA GAAGCGCGTG CTGAAGATCC GCGAAGGCTG CGACCTGATG CTGACGCTGC TGCCGTTCGA GGCGCGGTTC TACGAAGAGC AGGGTGTGCC AGTGCGTTTT GTTGGCCACC CGCTGGCAGA CACCATCCCG CTTGAAGCCG ACCGCCCGGC CGCGCGCGCC GCGCTGGGCC TGGGCGAGGG GCCGGTGGTG GCATTGATGC CGGGCAGCCG GGGCGGCGAA GTAGGGCGCC TGGGCGCATT GTTCCTCGAC GCCGCCGAGC GCCTTTGCCA ACAAGTGCCG GGTGTGCGCT TCGTGTTGCC CTGCGCCAAC GCCACGCGGC GCGCCCAGAT CGAACAGATG CTTGAAGGGC GCCAACTGCC GCTGACCCTG CTCGATGGCC AGTCGCACCA GGCCCTGGCG GCCTGTGACG CGGTGCTGAT CGCCTCGGGT ACCGCCACCC TCGAGGCGCT GCTGTACAAG CGGCCGATGG TGGTGGCGTA CCGCCTGGCG CCCTTGACCT TCTGGATTCT CAAGCGTCTG GTGAAAAGCC CTTACGTGTC ATTGCCGAAC CTGCTGGCCC AGCGAGAGCT GGTGCCCGAG TTGCTGCAGG ACGACGCGAC CAGCGAAGCG CTGGCCAACA CCCTGGCGCC GCTGGTGCGC GATGGAAGCC AGCAGACCGA ACGTTTCGAC GAAATTCACC GCACCCTGCG CCGTGACGCC TCCAATCAGG CGGCCGAGGC GGTACTGGCC CTGCTCAAGG ACCGCTGA
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Protein sequence | MAQLCVALVA GEASGDILGS GLMRALKARH PDVRFIGVGG PLMEAEGLQS YFPMERLAVM GLVEVLGRLR ELLKRRKLLI QTLIEEKPDV FIGIDAPDFT LNIELKLRQA GIKTVHYVSP SVWAWRQKRV LKIREGCDLM LTLLPFEARF YEEQGVPVRF VGHPLADTIP LEADRPAARA ALGLGEGPVV ALMPGSRGGE VGRLGALFLD AAERLCQQVP GVRFVLPCAN ATRRAQIEQM LEGRQLPLTL LDGQSHQALA ACDAVLIASG TATLEALLYK RPMVVAYRLA PLTFWILKRL VKSPYVSLPN LLAQRELVPE LLQDDATSEA LANTLAPLVR DGSQQTERFD EIHRTLRRDA SNQAAEAVLA LLKDR
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