Gene Pput_4173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4173 
SymbollpxB 
ID5193276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4671572 
End bp4672699 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content66% 
IMG OID640588650 
Productlipid-A-disaccharide synthase 
Protein accessionYP_001269481 
Protein GI148549379 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0763] Lipid A disaccharide synthetase 
TIGRFAM ID[TIGR00215] lipid-A-disaccharide synthase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAGC TTTGCGTAGC GCTGGTCGCG GGTGAGGCCA GTGGCGATAT TCTTGGTTCA 
GGCTTGATGC GTGCCCTCAA GGCACGCCAC CCCGACGTGC GGTTCATCGG GGTTGGCGGC
CCCTTGATGG AAGCTGAGGG CCTGCAATCC TATTTCCCCA TGGAGCGCCT GGCCGTCATG
GGGCTGGTCG AGGTACTCGG GCGTCTGCGC GAGCTGCTCA AGCGCCGCAA GTTGCTGATC
CAGACCCTGA TCGAAGAAAA GCCCGACGTA TTCATCGGCA TCGACGCCCC TGACTTCACC
CTCAACATCG AACTGAAGCT GCGCCAGGCC GGGATCAAGA CCGTGCACTA TGTCAGCCCG
TCAGTGTGGG CCTGGCGGCA GAAGCGCGTG CTGAAGATCC GCGAAGGCTG CGACCTGATG
CTGACGCTGC TGCCGTTCGA GGCGCGGTTC TACGAAGAGC AGGGTGTGCC AGTGCGTTTT
GTTGGCCACC CGCTGGCAGA CACCATCCCG CTTGAAGCCG ACCGCCCGGC CGCGCGCGCC
GCGCTGGGCC TGGGCGAGGG GCCGGTGGTG GCATTGATGC CGGGCAGCCG GGGCGGCGAA
GTAGGGCGCC TGGGCGCATT GTTCCTCGAC GCCGCCGAGC GCCTTTGCCA ACAAGTGCCG
GGTGTGCGCT TCGTGTTGCC CTGCGCCAAC GCCACGCGGC GCGCCCAGAT CGAACAGATG
CTTGAAGGGC GCCAACTGCC GCTGACCCTG CTCGATGGCC AGTCGCACCA GGCCCTGGCG
GCCTGTGACG CGGTGCTGAT CGCCTCGGGT ACCGCCACCC TCGAGGCGCT GCTGTACAAG
CGGCCGATGG TGGTGGCGTA CCGCCTGGCG CCCTTGACCT TCTGGATTCT CAAGCGTCTG
GTGAAAAGCC CTTACGTGTC ATTGCCGAAC CTGCTGGCCC AGCGAGAGCT GGTGCCCGAG
TTGCTGCAGG ACGACGCGAC CAGCGAAGCG CTGGCCAACA CCCTGGCGCC GCTGGTGCGC
GATGGAAGCC AGCAGACCGA ACGTTTCGAC GAAATTCACC GCACCCTGCG CCGTGACGCC
TCCAATCAGG CGGCCGAGGC GGTACTGGCC CTGCTCAAGG ACCGCTGA
 
Protein sequence
MAQLCVALVA GEASGDILGS GLMRALKARH PDVRFIGVGG PLMEAEGLQS YFPMERLAVM 
GLVEVLGRLR ELLKRRKLLI QTLIEEKPDV FIGIDAPDFT LNIELKLRQA GIKTVHYVSP
SVWAWRQKRV LKIREGCDLM LTLLPFEARF YEEQGVPVRF VGHPLADTIP LEADRPAARA
ALGLGEGPVV ALMPGSRGGE VGRLGALFLD AAERLCQQVP GVRFVLPCAN ATRRAQIEQM
LEGRQLPLTL LDGQSHQALA ACDAVLIASG TATLEALLYK RPMVVAYRLA PLTFWILKRL
VKSPYVSLPN LLAQRELVPE LLQDDATSEA LANTLAPLVR DGSQQTERFD EIHRTLRRDA
SNQAAEAVLA LLKDR