| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4166 |
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| Symbol | |
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| ID | 5192904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4661984 |
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| End bp | 4662829 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640588643 |
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| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
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| Protein accession | YP_001269474 |
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| Protein GI | 148549372 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
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| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.569907 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGA AGATCATTCG CGTCGGTAAC ATCGAGATCG CCAACGACAA GCCGTTCGTC
CTGTTCGGCG GCATGAACGT TCTGGAATCC CGTGACCTGG CGATGAAGGT CTGCGAAGAG
TACGTGCGGG TTACCGAGAA GCTCGGTATC CCGTACGTGT TCAAGGCCAG TTTCGACAAG
GCCAACCGTT CGTCGGTAAC GTCCTACCGT GGCCCTGGCA TGGAAGAGGG GCTGAAGATC
TTCGAAGAGA TCAAGCGCAC CTTCAACGTG CCGGTGATCA CCGACGTGCA CGAGCCTTAC
CAGGCCGAGC CCGTCGCCAA GGTATGCGAC ATCATCCAGC TGCCGGCTTT CCTGTCGCGC
CAGACTGACC TGGTGGTGGC CATGGCCAAG ACCGGCGTGG TGATCAACAT CAAGAAGGCT
CAGTTCCTCG CACCTCAGGA AATGAAACAC ATCCTGGCCA AGTGCGAAGA AGCCGGTAAC
GACCAGTTGA TACTCTGCGA GCGTGGTTCG AGCTTCGGCT ACAACAACCT GGTGGTCGAC
ATGCTGGGCT TCGGCATCAT GAAGCAGTTC GAGTACCCGG TGTTCTTCGA CGTGACCCAC
GCCCTGCAGA TGCCGGGTGG CCGCGCCGAT TCCGCCGGCG GCCGTCGGGC CCAGGTCACT
GACCTGGCCA AGGCCGGCAT GAGTCAGGGC CTGGCCGGGC TTTTCCTCGA AGCCCACCCC
GACCCGGACA ACGCCAAGTG CGATGGTCCA TGCGCCCTGC GCCTGGATAA ACTGGAGCCG
TTCCTGGTCC AGCTCAAGCA ATTGGACGAC CTGGTGAAAA GTTTTCCGAC GGTAGAAACC
GCGTAA
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| Protein sequence | MTQKIIRVGN IEIANDKPFV LFGGMNVLES RDLAMKVCEE YVRVTEKLGI PYVFKASFDK
ANRSSVTSYR GPGMEEGLKI FEEIKRTFNV PVITDVHEPY QAEPVAKVCD IIQLPAFLSR
QTDLVVAMAK TGVVINIKKA QFLAPQEMKH ILAKCEEAGN DQLILCERGS SFGYNNLVVD
MLGFGIMKQF EYPVFFDVTH ALQMPGGRAD SAGGRRAQVT DLAKAGMSQG LAGLFLEAHP
DPDNAKCDGP CALRLDKLEP FLVQLKQLDD LVKSFPTVET A
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