| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4161 |
|---|
| Symbol | |
|---|
| ID | 5192633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 4657149 |
|---|
| End bp | 4658261 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640588638 |
|---|
| Product | S-(hydroxymethyl)glutathione dehydrogenase |
|---|
| Protein accession | YP_001269469 |
|---|
| Protein GI | 148549367 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1062] Zn-dependent alcohol dehydrogenases, class III |
|---|
| TIGRFAM ID | [TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.983661 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.423904 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAGT CCCGTGCTGC CGTAGCCTTC GAAGCCAAGA AACCCCTGGA AATCGTCGAA
GTCGACGTGG CCATGCCAAA GGCCGGTGAA GTGCTGCTGC GCGTGGTCGC CAGCGGTGTC
TGCCACACCG ATGCCTATAC CCTGTCCGGT GCTGACCCGG AAGGGATCTT CCCATCGATC
CTCGGCCACG AAGGCGGTGC CATCGTCGAA GCGGTGGGCG AGGGGGTGAC CTCGGTCGCC
GTGGGTGACC ACGTCATCCC GCTGTACACC CCGGAATGCG GCAAGTGCAA GTTCTGCCTC
TCGGGCAAGA CCAACCTGTG CCAGGCCATT CGCGCCACCC AAGGCAAGGG CCTGATGCCG
GACGGCACCA CGCGCTTCTC GTACAAGGGC CAGCAACTGT TCCACTACAT GGGCACCTCG
ACGTTCTCCG AATACACCGT GCTGCCGGAA ATTTCCGTGG CCAAGATCCA GAAAGAAGCA
CCACTGGAAA AGGTCTGCCT GCTGGGCTGC GGCGTCACCA CCGGTATCGG CGCGGTACTC
AACACTGCCA AGGTCAAGCC GGGTGATACC GTGGCCATCT TCGGCCTCGG TGGCATCGGC
CTGTCGGCCG TGATCGGTGC GGTCAAGGCC AAGGCCTCGC GTATCATCGC CATCGACATC
AACCCGGCCA AGTTCGAAAT CGCCCGCCAA CTGGGTGCCA CCGATTGCAT CAACCCGAAA
GACTACGATC GCCCGATCCA GGAAGTGATC GTCGACCTCA CCGATGGTGG CGTGGACTTC
TCCTTCGAGT GCATCGGCAA CGTTCAGCTG ATGCGCGCCG CCCTGGAATG CTGCCACAAG
GGCTGGGGTG AGTCGGTGAT CATCGGTGTG GCCGGTGCCG GCCAGGAAAT TTCCACGCGT
CCGTTCCAGC TGGTTACCGG TCGGGTCTGG CGTGGTTCGG CGTTCGGCGG GGTGCGTGGC
CGCAGCGAAC TGCCGAGCTA CGTGGAAATG TCCGAGAAAG GCGAGATCCC GCTGGACACC
TTCATCACCC ACACGATGGG GCTGGAAGAC ATCAACAAGG CCTTCGACCT GATGCATGAA
GGCAAGAGCA TCCGTAGCGT GATCCACTTC TGA
|
|---|
| Protein sequence | MIKSRAAVAF EAKKPLEIVE VDVAMPKAGE VLLRVVASGV CHTDAYTLSG ADPEGIFPSI
LGHEGGAIVE AVGEGVTSVA VGDHVIPLYT PECGKCKFCL SGKTNLCQAI RATQGKGLMP
DGTTRFSYKG QQLFHYMGTS TFSEYTVLPE ISVAKIQKEA PLEKVCLLGC GVTTGIGAVL
NTAKVKPGDT VAIFGLGGIG LSAVIGAVKA KASRIIAIDI NPAKFEIARQ LGATDCINPK
DYDRPIQEVI VDLTDGGVDF SFECIGNVQL MRAALECCHK GWGESVIIGV AGAGQEISTR
PFQLVTGRVW RGSAFGGVRG RSELPSYVEM SEKGEIPLDT FITHTMGLED INKAFDLMHE
GKSIRSVIHF
|
|---|
| |