| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4157 |
|---|
| Symbol | surE |
|---|
| ID | 5193195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 4653908 |
|---|
| End bp | 4654657 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640588634 |
|---|
| Product | stationary phase survival protein SurE |
|---|
| Protein accession | YP_001269465 |
|---|
| Protein GI | 148549363 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0496] Predicted acid phosphatase |
|---|
| TIGRFAM ID | [TIGR00087] 5'/3'-nucleotidase SurE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0755063 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATTC TGATTTCGAA TGACGACGGT GTTACCGCAC CTGGCATCGC CGCGCTGCAC
GCTGCGCTGG TGGATTATGC CGAGTGCGCG GTGATCGCCC CGGATCAAGA CAAGAGCGGC
GCCAGCAGTT CGCTGACGCT GGACCGGCCA CTGCATCCGC AGACCCTGGC CAATGGCTTC
ATCAGCCTCA ACGGCACGCC GACCGACTGC GTGCACCTGG GGCTCAATGG GCTGTTGCCA
CAGACGCCGG ACATGGTCGT GTCGGGGATC AACCTTGGTG CCAACCTGGG CGATGACGTG
CTGTATTCGG GAACGGTCGC TGCGGCGCTG GAAGGCCGCT TCCTCGGCGG TACCTCGCTG
GCGTTCTCGC TGTTGTCGCG CCAGCCGGAC AACCTGCCGA CTGCGGCCTA TATCGCCCGT
CGTCTGGTCG AGGCACAGTC GCGCCTGGTG TTGCCGCCAC GCACCGTACT CAACGTCAAT
ATTCCCAACT TGCCGCTGGA GCACATCCGT GGCATCCAGC TCACCCGTCT CGGTCACCGG
GCGCGGGCGG CGGCGCCCAC CAAGGTGGTC AACCCGCGTG GCAAGGAAGG CTACTGGATT
GCCGTGGCCG GTGATGCCGA GGACGGCGGC CCGGGCACCG ACTTCCACGC GGTGATGCAA
GGCTACGTAT CGATTACCCC ATTGCAGCTC GACCGCACCT TCAATGATGC CTTCGAGCAG
CTCGATGGAT GGCTGGAGGG CCTGCTCTGA
|
|---|
| Protein sequence | MRILISNDDG VTAPGIAALH AALVDYAECA VIAPDQDKSG ASSSLTLDRP LHPQTLANGF
ISLNGTPTDC VHLGLNGLLP QTPDMVVSGI NLGANLGDDV LYSGTVAAAL EGRFLGGTSL
AFSLLSRQPD NLPTAAYIAR RLVEAQSRLV LPPRTVLNVN IPNLPLEHIR GIQLTRLGHR
ARAAAPTKVV NPRGKEGYWI AVAGDAEDGG PGTDFHAVMQ GYVSITPLQL DRTFNDAFEQ
LDGWLEGLL
|
|---|
| |