| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4150 |
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| Symbol | |
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| ID | 5192287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4645368 |
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| End bp | 4646348 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640588627 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001269458 |
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| Protein GI | 148549356 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0489444 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCCGC GAAAGAAGGA TAGGCACCTA CCCCCGTGCA TGTACATGAA GCACGGGGCG
TACTACCTGG TCAGGAAGGG AAAGTGGGAG CGCCTCGACA AGGATTACCA AGGCGCCCTG
CTGGCCTACG CGAAGATCAT GGGCGGCAAA GGCCAAGGCG AGATGCCGCG GCTCATTGAT
GACGCCCTGG ACGCTATGCG TAAGCGCCTG GCCGAGAACA CCATCAAGCA GTACGAGGCC
GCCGCCGAGA AGCTGAAGAA GTATCTAGCC GAGTTCGAGC CGCGCCAGGT GCTGCCGAGG
CATGTGGCAG CGCTCAAGCT GCACATGTCC GACACGCCAA ACATGGCAAA CCGGGTCATC
TCGTTCCTGA GGATGGTGTT CAACTATGCC CTCGAACAGC AGATAGTCGA TTCCAACCCC
TGCACCGGGA TCAAGCGGCA CACCGAGAAG AAGCGCGACC GGTACATCAC CGACGAGGAA
TTTGCGGCGA TTTGCGACGC GGCGTCGCCG TACATCAGGT CGATTCTCGA AATGTGCTAC
CTGACAGGAC AGCGCATTGG CGACGTGCTG GCCATCAAAC TCTCGGACAT CAGCGAAAAG
GGCATAGCCT TCGACCAGCA AAAGACCGGA GCCAAGCTCA TTGTGGGCAT GACCCCGGAC
CTTGAACAGC TGATTGCCAG GACCAAGGCC ATCCCCAGAA AGGTACGGGG CCTCACCTTG
TTCTGCACCC GGGGCGGCGG CAAGCCGGTC TCCTACGAGA CGGTGAAGGA CGCCTTCAAG
AAGGCTTGCG AGAAAGCGAA GGTCACCGGG GCAACCATCC ACGACCTCAG GGCGAAATCA
CTGACTGACA CCGACGACCA GGGCAACGAC GCCCAAAAAC TCGGCGGCCA CACCAACGCC
AAGATGACTG AGCGCTACCT GCGCCTGCGT AAAATTGACA TCGCGCAGCC GCCAGTCCTA
CCGAAAACTG ATCGGAAATG A
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| Protein sequence | MRPRKKDRHL PPCMYMKHGA YYLVRKGKWE RLDKDYQGAL LAYAKIMGGK GQGEMPRLID
DALDAMRKRL AENTIKQYEA AAEKLKKYLA EFEPRQVLPR HVAALKLHMS DTPNMANRVI
SFLRMVFNYA LEQQIVDSNP CTGIKRHTEK KRDRYITDEE FAAICDAASP YIRSILEMCY
LTGQRIGDVL AIKLSDISEK GIAFDQQKTG AKLIVGMTPD LEQLIARTKA IPRKVRGLTL
FCTRGGGKPV SYETVKDAFK KACEKAKVTG ATIHDLRAKS LTDTDDQGND AQKLGGHTNA
KMTERYLRLR KIDIAQPPVL PKTDRK
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