Gene Pput_4127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4127 
Symbol 
ID5194043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4632464 
End bp4632892 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content66% 
IMG OID640588604 
ProductVRR-NUC domain-containing protein 
Protein accessionYP_001269435 
Protein GI148549333 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.649102 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCGC CCGCCATTCG CCCGTTCAGG GCCAAGCCGA CTCGCGCCAA GCCCGTCGAC 
CGGGAAGGGC AGGAGCAGGC CGCGCTGATG CAGGAGCTGC AACTGCGCTA TCCGCAGGCC
TACAAGCTGA TCTACCACGT CCCGAACGGC GGGCACCGGG TCAAGGCGGT GGCTGCCAAG
CTGAAGGGGC AGGGCGTGAA GGCCGGTGTG CCTGACCTGG TGCTGCCCAT GGCGCGAGGT
GGCTATTTCG GCCTATACAT CGAGTTCAAG GCCATGCCGC CCTATGACGC GCCGGTATCT
CCGAGCCAGG ATGCCTACCT GCAGGCGCTT GCCGATCAGG GCTACCTAGC GATCGTGTGC
CGGGGCAACA TCGACGCCGT CGAGGCCATC CGTGCCTACC TGCTGCAACC CGCCACGGTG
GCTGCATGA
 
Protein sequence
MNSPAIRPFR AKPTRAKPVD REGQEQAALM QELQLRYPQA YKLIYHVPNG GHRVKAVAAK 
LKGQGVKAGV PDLVLPMARG GYFGLYIEFK AMPPYDAPVS PSQDAYLQAL ADQGYLAIVC
RGNIDAVEAI RAYLLQPATV AA