Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4118 |
Symbol | |
ID | 5190343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4628389 |
End bp | 4628694 |
Gene Length | 306 bp |
Protein Length | 101 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640588595 |
Product | HNH endonuclease |
Protein accession | YP_001269426 |
Protein GI | 148549324 |
COG category | [V] Defense mechanisms |
COG ID | [COG1403] Restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.541887 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGGC TCAATATCCT GAAGCAGAAC GTGACGATGC TGCCGGCTAC CCCGGTCGCC CAGGTCAATG AGGCTCAATG GGGTGCTGGT CGTGGTGGTC GACCGTGGCG CCGCATTCGG GATCGGATCC TGTTGCGGGA TCAGTACACC TGCCGGGCCT GCGGCCTGGT CACAAAAGAC CTTGAGGTCG ACCACATCAT CAACGTCGCC GAGGGCGGCT CGGATGATGA CAGCAACCTT CAGGCCCTGT GCGTGCCGTG CCACCAGGAG AAGACTGCAG CTGAGGCGGC TAGAGGTCGT CGATAG
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Protein sequence | MARLNILKQN VTMLPATPVA QVNEAQWGAG RGGRPWRRIR DRILLRDQYT CRACGLVTKD LEVDHIINVA EGGSDDDSNL QALCVPCHQE KTAAEAARGR R
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