| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4116 |
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| Symbol | |
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| ID | 5191709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4626076 |
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| End bp | 4627743 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640588593 |
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| Product | phage terminase |
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| Protein accession | YP_001269424 |
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| Protein GI | 148549322 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4626] Phage terminase-like protein, large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.72688 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTGGA CCACCGCATG CCCGGACTGG GAACGGCGGT TGGTTCGAAG GCAGTCCATC
ATTCCGCCAC CCATCTTTGT CGAGGAAGCC GAGCGAGCTG TCCAGATCTT CAAGGAACTG
AAAGTTCCTG ATCTGCCGGG CAAGCCCCGT ATGGCTGACT GCTGTGATGA ATGGGTGCTC
GACTTTGTCA GAGCCATCTT TGGTGGCTAC GACTCGGAAA CAGGCAAGCA GCTGATTCGA
GAGTTTGGCC TGCTGATCAG CAAGAAGAAC ACCAAGTCGA CAATCGCCGC AGGGATCATG
CTGACGGCAC TTATCTTGTG CTGGAGGGAA GAGGAAGAGC ATCTGATCCT CGCTCCGACC
AGGGAGGTTG CCGACAACGC TTTCAAGCCG GCAGCTGCCA TGGTGCGTGC AGATGAAGAG
CTGTCAGCGA TGTTCCATGT ACAGGATCAC ATCCGCACCA TCACAGATCG CACGACGAAG
AACAGCCTGA AGGTTGTTGC AGCGGATACC GACACGGTGT CCGGTAAAAA GTCTGGCAAG
GTTCTGGTGG ACGAGCTCTG GGTATTTGGT AAGAAGCCAG GTGCTGAAGC CATGTTCATG
GAGGCACTGG GCGGCCAGGT CTCACGGGAT GAAGGCTGGG TCATCTACCT GACCACGCAA
AGTGATGAGC CACCGGCCGG TGTCTTCAAA GAGCGCCTGC AGTACTGGCG CGACATTCGC
GACGGAGTCA TTGAGGACCG AAAAACACTC GGGATTCTCT ATGAGTTCCC GAAGAGCATG
GTTCAGGACA AGTCGTACCT GGAGCCGGAA AACTTCTACA TCACCAACCC CAACCTGGGG
CGTTCGGTGA GCGCCGAGTG GCTGCAGGAT GAGCTGCGCA AGAAGCAGAA CGCCGGCGAT
GGGTCTCTAC AGAAATTCCT GGCTAAGCAC TTAAACATCG AAATCGGCCT GAACCTTCGC
TCAGATCGGT GGACCGGTGC TGACTTCTGG AAGGTTCAGG CAGACGCGTC GCTCAGCTTG
CAGGCGCTGC TCGAACAGTC GGAAGTTGTG ACAGTGGGTA TCGACGGCGG CGGGCTCGAC
GACCTGCTAG GCCTTACCGT GCTGGGGCGC AAATCCGGCT CCGACGTTTG GCTTTCTTGT
TCGCTTGCCT GGGCGCATCC AATTGCGCTG GACCGCCGAA AATCCGAGGA GTCGAAGTAT
CGCGATTTCG AGCGGGATGG CGACCTGGTG ATTATCGAAG AGCTGCCCGG TGATGTCGCC
GCCGTTGCTG ATGTGGTTGA AATGATCGAT GGCACAGGCT TGCTGGCTGG CGTCGGCATG
GACCCTGAAA AAACCCACAA GGTCATGCTC GAGGAACTGC TGAAGCGAAA GATAGACGAG
AAGATCATTT TCGGCATTCC GCAGGGGTGG AAGTTGGTGG GGGCGATCAG CATCGCAGAG
CGAAGGCTTG CAGAGCGTAA GCTTTTTCAT GCCGATCAGC CGCTGATGGA CTGGTGTGTT
GGCAATGCCC GCATCGAGTC GCGTGCCAAC TCGGTGTTGA TAACCAAGCA GGCCAGCGGT
ACCGCCAAGA TCGACCCGGT GATGGCACTA CTCAATGCCG TGTCCCTGAT GGCGACCAAC
CCGTCGCCAC CGGCCAAGAA GTACCAGATG TTTTTCCTCA ATTCGTAG
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| Protein sequence | MDWTTACPDW ERRLVRRQSI IPPPIFVEEA ERAVQIFKEL KVPDLPGKPR MADCCDEWVL
DFVRAIFGGY DSETGKQLIR EFGLLISKKN TKSTIAAGIM LTALILCWRE EEEHLILAPT
REVADNAFKP AAAMVRADEE LSAMFHVQDH IRTITDRTTK NSLKVVAADT DTVSGKKSGK
VLVDELWVFG KKPGAEAMFM EALGGQVSRD EGWVIYLTTQ SDEPPAGVFK ERLQYWRDIR
DGVIEDRKTL GILYEFPKSM VQDKSYLEPE NFYITNPNLG RSVSAEWLQD ELRKKQNAGD
GSLQKFLAKH LNIEIGLNLR SDRWTGADFW KVQADASLSL QALLEQSEVV TVGIDGGGLD
DLLGLTVLGR KSGSDVWLSC SLAWAHPIAL DRRKSEESKY RDFERDGDLV IIEELPGDVA
AVADVVEMID GTGLLAGVGM DPEKTHKVML EELLKRKIDE KIIFGIPQGW KLVGAISIAE
RRLAERKLFH ADQPLMDWCV GNARIESRAN SVLITKQASG TAKIDPVMAL LNAVSLMATN
PSPPAKKYQM FFLNS
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