| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4089 |
|---|
| Symbol | |
|---|
| ID | 5192463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 4602652 |
|---|
| End bp | 4603134 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640588566 |
|---|
| Product | CinA domain-containing protein |
|---|
| Protein accession | YP_001269397 |
|---|
| Protein GI | 148549295 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1546] Uncharacterized protein (competence- and mitomycin-induced) |
|---|
| TIGRFAM ID | [TIGR00199] competence/damage-inducible protein CinA C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCCGA TCACCACGCT CGCCACCCGC CTGGGTGAGC ACCTGCGCCG ATTCAATGCG
CAGGTGACTA CCGCCGAATC CTGCACCGGT GGTGGCATTG CCGAAGCCAT CACCCGCATA
CCTGGCAGCT CGGCCTGGTT CGAAGCCGGT TACGTCACCT ATTCCAATGC CCAGAAAACC
CGCCAGTTGG GAGTGCCTGA AGCGTTTTTC GGTCAGGTGG GGGCAGTCAG CCAGGAAGTG
GTCGAAGCCA TGGTCCGTGG GGCTCAGGCT GCCAGTGGCG CACGGTTTGC TGTGGCGGTG
AGTGGTGTGG CCGGGCCGGA CGGCGGCTCG CCAGCCAAAC CGGTGGGCAC TGTGTGGCTG
GCCTGGGGTG ACGGTAACCG GGTGTTCAGC GAACGTCGGC ACTTCGACGG TGACCGCGAG
GCGGTGCGTC GACAGACGGT GATCGCCGCG TTAGACGGCT TGTTACAGCT TGGTGCCGAG
TAA
|
|---|
| Protein sequence | MDPITTLATR LGEHLRRFNA QVTTAESCTG GGIAEAITRI PGSSAWFEAG YVTYSNAQKT
RQLGVPEAFF GQVGAVSQEV VEAMVRGAQA ASGARFAVAV SGVAGPDGGS PAKPVGTVWL
AWGDGNRVFS ERRHFDGDRE AVRRQTVIAA LDGLLQLGAE
|
|---|
| |