Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4083 |
Symbol | |
ID | 5194179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4597873 |
End bp | 4598583 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640588560 |
Product | DTW domain-containing protein |
Protein accession | YP_001269391 |
Protein GI | 148549289 |
COG category | [S] Function unknown |
COG ID | [COG3148] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCATG CGGTAGCGCG TCTGCGCGCC GAACGCCTGG CCCGCAGCAA CAAGCCTTTC ATCGCCCGTG GCTCGCGTGC CGAGCGTTGC CCGGATTGCC GGGTCATCGC CACCCATTGC CTGTGTGCCT GGAAGCCTAG GGTGCAGGCT GACGCGGGTG TGTGCCTGCT GATGCACGAC ACCGAGCCGC TGAAACCCAC CAACACCGGC TGGTTGATTG CCGACCTGAT TGAAGACACC TGGGCCTTCG GCTGGTTGCG CACCGCGGTT GACGAGCGCC TGCTGGCTTT GCTCGATGAC CCGCGCTGGC AGCCCTATAT CGTTTTTCCG GGCGAATTCG TTGCCCAGGA GCGGGTGGTC AGCGAGGTGG TGCGCGAGCC GGGCAAGCGT CCACTGTTCA TCCTGCTGGA TGCCACCTGG ACCGAAGCGC GCAAGATGTT CCGCAAAAGC CCGTACCTGG ACCGCTTCCC GGTGTTGAGC CTGCAAGCCG AGCAGATGTC GCGCTACCGC CTGCGGCGCT CCAAGCGCGA TGATCATTTC TGTACGGCAG AAGTTGCGGC CATGTGCCTG GACCTTGCTG GCGATAGCCA GGCTTCGCAG GCGCTGGATG CTTACCTTGA TGTGTTCAGC CTGCATTACC TGAGCGGCAA ACGGCGGCTA CCGCTTGACG AGCAGGACGA CACCCACCAG CGTTTGCATA CCTTCCTATA G
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Protein sequence | MSHAVARLRA ERLARSNKPF IARGSRAERC PDCRVIATHC LCAWKPRVQA DAGVCLLMHD TEPLKPTNTG WLIADLIEDT WAFGWLRTAV DERLLALLDD PRWQPYIVFP GEFVAQERVV SEVVREPGKR PLFILLDATW TEARKMFRKS PYLDRFPVLS LQAEQMSRYR LRRSKRDDHF CTAEVAAMCL DLAGDSQASQ ALDAYLDVFS LHYLSGKRRL PLDEQDDTHQ RLHTFL
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