Gene Pput_4079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4079 
Symbol 
ID5192536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4594785 
End bp4595564 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content61% 
IMG OID640588556 
Productoxidoreductase FAD/NAD(P)-binding subunit 
Protein accessionYP_001269387 
Protein GI148549285 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACA TGAACCACGA ACGTGTCCTC AGTGTGCACC ACTGGAACGA CACCCTGTTC 
AGCTTCAAGT GCACCCGCGA CCCGGGCCTG CGCTTCGAGA ACGGTCAGTT CGTGATGATC
GGCCTGCAGC AGGACAACGG CCGTCCGCTC ATGCGTGCCT ACTCCATCGC TTCGCCAAAC
TGGGAAGAGC ACCTTGAATT CTTCAGCATC AAGGTGCCGG ATGGCCCGCT GACCTCGCAG
CTGCAGCACC TGAAGGAAGG CGATGAGATC ATCATCAGCA AGAAGCCTAC CGGCACCCTG
GTGCTCGACG ACCTGAATCC TGGCAAGCAC CTGTACCTGC TGAGCACCGG CACTGGCCTG
GCGCCGTTCA TGAGCGTCAT CCAGGACCCG GAAACCTACG AGCGCTTTGA AAAAGTGATC
CTGGTGCACG GCGTGCGCTA CGTGAACGAA GTGGCCTACC GCGAGTTCAT CACCGAGCAC
CTGCCGCAGA ACGAGTTCTT CGGTGAGTCG GTTCGCGACA AGCTGATCTA CTACCCGACC
GTGACCCGCG AGCCGTTCGA AAACCAGGGC CGTCTGACCG ACCTGATGCG CAGCGGCAAG
CTGTTCAGTG ACATCGGCCT GCCGCCGATC AACCCGCAAG ACGACCGCGC GATGATCTGT
GGCAGCCCGA GCATGCTCGA CGAGACCAGC GAAGTGCTGG ACAGCTTCGG CCTGAAGATC
TCCCCGCGCA TGCGCGAGCC GGGTGACTAC CTGATCGAGC GTGCCTTCGT CGAGAAGTAA
 
Protein sequence
MSNMNHERVL SVHHWNDTLF SFKCTRDPGL RFENGQFVMI GLQQDNGRPL MRAYSIASPN 
WEEHLEFFSI KVPDGPLTSQ LQHLKEGDEI IISKKPTGTL VLDDLNPGKH LYLLSTGTGL
APFMSVIQDP ETYERFEKVI LVHGVRYVNE VAYREFITEH LPQNEFFGES VRDKLIYYPT
VTREPFENQG RLTDLMRSGK LFSDIGLPPI NPQDDRAMIC GSPSMLDETS EVLDSFGLKI
SPRMREPGDY LIERAFVEK