| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4078 |
|---|
| Symbol | |
|---|
| ID | 5191975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 4594104 |
|---|
| End bp | 4594598 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640588555 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001269386 |
|---|
| Protein GI | 148549284 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3091] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAGC AGCTCAAACA ACGCGTCGAA ACCTGTTACC AGCAAGCCGA AGCCTTTTTC
AAACGCCGCT TCCCGCGCCC CGAAGTCAGC TTCAAACTGC GCGGGCAAAA AGCCGGCGTC
GCCCACCTGC ACGAGAATCT GCTGCGCTTC AACCTGCAGC TCTACCGCGA AAACCAGGAA
GACTTCCTGC GCCAGACCGT GGCCCATGAA GTGGCACACC TGGTTGCCCA CCAGCTGTTT
GGCGACCGCA TCCAGGCCCA TGGTGAAGAG TGGCAGTTGA TCATGCGCGG GGTGTATGAA
CTGCCGCCCA ATCGTTGCCA TAACTATGAC GTGCAACGGC GCGCAGTGAC CCGCTACATC
TACCGCTGCC CGTGCCCGCA AAGCGACTTC CCGTTTACCG CGCAGCGGCA CAAGCTGGTG
CACCAAGGGC GGCGATACCT GTGCAAGCGG TGCCGGGAAA TCCTGGTGTA CAGCGGCGAG
ACGCGGGTCG AATAG
|
|---|
| Protein sequence | MPEQLKQRVE TCYQQAEAFF KRRFPRPEVS FKLRGQKAGV AHLHENLLRF NLQLYRENQE
DFLRQTVAHE VAHLVAHQLF GDRIQAHGEE WQLIMRGVYE LPPNRCHNYD VQRRAVTRYI
YRCPCPQSDF PFTAQRHKLV HQGRRYLCKR CREILVYSGE TRVE
|
|---|
| |