Gene Pput_4076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4076 
Symbol 
ID5193443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4592285 
End bp4593109 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content60% 
IMG OID640588553 
ProductC32 tRNA thiolase 
Protein accessionYP_001269384 
Protein GI148549282 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCACCC TCTCGGTCAA CCAGAACAAA CTGCAAAAAC GCCTGCGTCG TCTCGCTGGC 
GAAGCCATCA CCGACTACAA CATGATCGAG GATGGCGACA AGGTCATGGT CTGCCTGTCC
GGCGGCAAGG ACAGCTACAC CATGCTCGAC GTTCTGTTGC ACCTGCAGAA GGTGGCACCG
ATCACGTTCG AGATCGTTGC GGTGAACATG GACCAGAAAC AGCCGGGCTT CCCTGAGCAC
GTACTGCCGG CCTACCTCAA GGAACTGGGG GTCGAGTACC ACATCGTCGA GAAGGATACC
TACTCGGTGG TAAAGGAGCT GGTACCCGAA GGCAAGACCA CTTGCTCGCT GTGTTCGCGC
CTGCGCCGCG GTACCCTGTA CACCTTCGCC GACGAAATCG GCGCCACCAA GATGGCGCTG
GGGCATCACC GCGACGACAT CGTCGAAACC TTCTTCCTCA ACATGTTCTT CAACGGCGCG
CTCAAGGGCA TGCCGCCGAA GCTGCGCGCC GACGATGGCC GCAACGTGGT GATCCGCCCG
CTGGCCTACT GCAGCGAGAA GGACATCCAG GCCTACTCGG ACATGAAGGC ATTCCCGATC
ATCCCGTGCA ACCTGTGCGG CTCGCAGGAA AACCTGCAGC GCCAGGTGGT CAAGGACATG
CTGGTGGAGT GGGAACGCAA GCACCCGGGC CGTACCGAGA GCATCTTCCG TGCCCTGCAG
AACGTGGCAC CGTCGCAGCT GGCCGACCGG AACCTGTTTG ACTTCACCAG CCTGAAGATC
GACGAAAACG CTACCCCGCG TTTCCTCGAC GTGCTGAACA TCTGA
 
Protein sequence
MGTLSVNQNK LQKRLRRLAG EAITDYNMIE DGDKVMVCLS GGKDSYTMLD VLLHLQKVAP 
ITFEIVAVNM DQKQPGFPEH VLPAYLKELG VEYHIVEKDT YSVVKELVPE GKTTCSLCSR
LRRGTLYTFA DEIGATKMAL GHHRDDIVET FFLNMFFNGA LKGMPPKLRA DDGRNVVIRP
LAYCSEKDIQ AYSDMKAFPI IPCNLCGSQE NLQRQVVKDM LVEWERKHPG RTESIFRALQ
NVAPSQLADR NLFDFTSLKI DENATPRFLD VLNI