Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4068 |
Symbol | |
ID | 5194482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 4587620 |
End bp | 4588609 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640588545 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
Protein accession | YP_001269376 |
Protein GI | 148549274 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.902236 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGCCC TGTTGTTCAG CAGCCAGCAC TACGATCAGG AAAGCTTCAC CAAGGCTGCC AGCGGCACCA CCTTGGAGCT GCATTTCCAG CCCGCCCGCC TGACCCTCGA CACCGCCGCC CTGGCAGAGG GCTTTGAGGT GGTCTGCGCC TTCATCAATG ACGAACTCGA CGCGCCGGTG CTGCAGCGCC TGGCCGCAGC CGGCACGCGG TTGATCGCCC TGCGCTCGGC CGGCTACAAC CACGTCGACC TGGCCGCCGC CCAGCGCTTG GGCCTGGCCG TGGTGCGCGT GCCGGCCTAC TCGCCACACG CCGTTGCCGA GCACGCCGTG GCGCTCATCC TGGCACTCAA CCGGCGCCTG CATCGGGCCT ACAACCGCAC CCGCGAAGGT GACTTCACCC TGCACGGGCT GACCGGCTTC GACCTGCACG GAAAAACCGT CGGGGTGGTC GGTACCGGCC AGATCGGGGC CGCCTTCGCT CGCATCATGG CCGGTTTCGG CTGCCAGCTG CTGGCGTACG ACCCCTACCC CAACCCAGAG CTGCTGGCCC TTGGCGCCCG CTACATGCCC CTGCCCGAGC TGTTGCGCGA AGCCCGCATC ATCAGCCTGC ACTGCCCGCT GACCGAGCAC ACTCGCCACC TGGTCAACGC GCAAAGCCTG GCCCAGTTGC AGCCCGGCGC CATGCTGATC AACACCGGTC GCGGTGCGCT GGTCGACACC CCGGCGCTGA TCGACGCACT GAAAAGCGGC CAGCTTGGCT ACCTGGGCCT GGACGTCTAC GAGGAAGAAG CCCAACTGTT CTTCGAGGAC CGCTCCGACC TGCCCTTGCA AGACGATGTG TTGGCTCGGC TGCTGACCTT CCCCAACGTG ATCATCACCG CCCACCAGGC TTTCCTCACC CGCGAGGCGC TGGATGCCAT TGCCGCGACC ACACTGGACA ACATCAACCG CTGGGCGGCA GGCAATCCAC AGAACCTGGT GATGGGTTAA
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Protein sequence | MRALLFSSQH YDQESFTKAA SGTTLELHFQ PARLTLDTAA LAEGFEVVCA FINDELDAPV LQRLAAAGTR LIALRSAGYN HVDLAAAQRL GLAVVRVPAY SPHAVAEHAV ALILALNRRL HRAYNRTREG DFTLHGLTGF DLHGKTVGVV GTGQIGAAFA RIMAGFGCQL LAYDPYPNPE LLALGARYMP LPELLREARI ISLHCPLTEH TRHLVNAQSL AQLQPGAMLI NTGRGALVDT PALIDALKSG QLGYLGLDVY EEEAQLFFED RSDLPLQDDV LARLLTFPNV IITAHQAFLT REALDAIAAT TLDNINRWAA GNPQNLVMG
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