Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4067 |
Symbol | |
ID | 5194481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 4584790 |
End bp | 4587543 |
Gene Length | 2754 bp |
Protein Length | 917 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640588544 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_001269375 |
Protein GI | 148549273 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.125923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCGATC GCTTGGGAAT CCGCAGCCGG GTACTGCTGC TGGCACTGCT ACCGGCCGGC TTGATGGCCC TGGTGCTGGG TAGCTATTTC ACCTGGCTGC AACAGAACGA CCTGCGCACC CAGCTGCTGC AGCGCGGCAA GATGATCGCC GAACAACTGG CGCCCCTGGC CGCACCGGCC ATGGCCCGGC TCGCGCCTGC GCAACTGGAG CGAATTGCCG CACAAACCCT GGAGCAGGCC GATGTGCGCG CAGTGGCGTT TCTGGCCCCG GACCGCACGC GCCTGGCCCA CGCTGGCCCA AGCATGCTCA ACCTGCCGCC CAGCGGCGGT ACCGGCACCC AACTCCTGCA GCGCAGTGGC AACGACGCCA CCCGCTACCT GATGCCCGTG TTCGGCCACC ACCGCGACCT GGCCACCGAC GCCGTGCCGG CCGAAGCCGA GCGCCTGCTG GGCTGGGTAG AGATCGAGCT GTCGCACGAC GGCACGCTGC TGCGCGGCTA CCGCAACCTG TTTACCAGCC TGTTGCTGAT CCTCGCCTGC CTGGCACTCA GCGGCCTGTT GGCGCTGCGC ATGAGCCGCA CCATCAACGA CCCCATCGAA CGCATCAAGC ACGCGGTCAA TCAGCTCAAG GACGGCCACC TCGAAGAACG CCTGCCGACC ATGGGCAGCC ATGAGCTGGA CGAACTGGCC CACGGCATCA ACCGCATGGC CGAAACCCTG CAAAACGCCC ACGAAGAACT GCAACACAGC ATCGACCAGG CCACCGAAGA CGTGCGCCAG AACCTGGAAA CCATCGAAAT CCAGAACATC GAGCTGGACA TGGCGCGCAA AGAGGCACTT GAGGCCAGCC GCATCAAGTC GGAGTTCCTG GCCAACATGA GCCACGAAAT CCGCACCCCG CTCAATGGCA TCCTCGGCTT TACCCACCTG CTGCAAAAAA GCGAGATGAC ACCGCGCCAG CTCGACTACC TGAACACCAT CGAGAAGTCT GCTGACAACC TGCTGGGAAT CATCAACGAG ATCCTCGATT TCTCCAAGAT CGAAGCCGGC AAGCTGGTGC TCGACAGCAT ACCGTTCAAC CTGCGGGACC TGATCCAGGA CACCCTGACC ATCCTCGCTC CGGCCGCCCA CGCCAAGCAG CTGGAATTGC TGAGCCTGAT CTACCGCGAC ACGCCTGCTT CGCTGGTGGG CGACCCGTTG CGGCTCAAGC AGATCCTCAC CAACCTGGTC AGCAACGCCA TCAAGTTCAC CCGCGAAGGC ACCATCGTCG TACGCGCCAT GCTGGAAGAC GAGCACGAAG ACTGCGCGCA GTTGCGCATC AGCGTGCAGG ACACCGGCAT CGGCCTGTCA CCCCAGGATG TGCGCACACT GTTCCAGGCC TTCAGCCAGG CTGACAACTC ACTGGCTCGC CAGCCCGGTG GCACCGGTCT GGGGCTGGTG ATTTCCAAGC GCCTGATCGA ACAGATGGGC GACGAGATCG GTGTCGACAG TACCCCGGGC GAAGGTTCGC AGTTCTGGAT CAGCCTCAAC CTGCCCAAGG CTCATGACGA TGCCGAAGCG CTGCCACCGC AGCCATTGCT GGGCCGCCGT GCCGCCATTG TCGATGGCCA CGAACTGGCG CGCCAGGCAC TGGAGCACCA GCTGGAAGAC TGCGGCCTCA GCGTGAGCCT GTTCGCCTCC TACGACCAGT TGCTGCAGGG GGTGCAGGCC GCCAGCCAGG CCGGCCTGCC CTTCGAGTTC GCGGTGCTCG GGGCCAACCT GGGTAACCTG TCGCCCGAGC AACTGGGCCA TTATCATCAG CAGCTCGAGC GTTACCACTG CCAATGCGTG GTGCTATGCC CGACCACCGA GCAGGCGCTG TACCACCCTT ACCTGCCCAA CGGCCACGGC CAGTTGCTGT CCAAGCCGAC CTGCACCCGC AAGCTGCGGC GCCTCTTGCT GGAGCTGGTA CAACCTCGCC GTCCGCTGGC CGAGATGAGC AACGCCAACG GCCAGCGACG ACCGAAAATA CTCTGCGTCG ACGACAATGC CGCCAACCTG CTGCTGGTAA AAACCCTGCT CGAAGACTTG GGTGCCGAGG TACTGGCCGT CAACAATGGC TATGCGGCGG TACAGGCCGT GCAGGAGGAG TTGTTCGACC TGGTGCTGAT GGATGTGCAG ATGCCCGGCA TGGACGGCCG CGCCTGTACT GAACAGATCC GCCTGTGGGA AAACACCCAG AGCGGCAACC CGCTGCCGAT CGTCGCCCTC ACTGCCCATG CCATGGCCAA CGAAAAACGC GCGTTGTTGC ACAGCGGCAT GGACGACTAC CTGACCAAAC CGATCAGCGA ACGGCAACTG GCCCAGGTGG TGATGAAGTG GACCGGCCTG AGCCTGGGCA CACCCCAGCA GGCGCAGCCC GAGCTACTGA CCAATGGCGA CGAACTGAAG GTACTCGACC CCGAAGAGGG CCTGCGCCTG GCCGCTGGCA AGGCAGATCT GGCCGCTGAC ATGCTGAGCA TGCTGCTGGC CTCCCTGGAT ACGGACCGCG AAGCCATACG CGCCGCCCGC GAAGCCGATG ACCGCAATGG CCTGATCGAG CAAGTACACC GTCTGAACGG GGCCTCACGC TATTGTGGCG TACCGCAGTT ACGGGCAGCG TGCCAACGCA GCGAGACCTT GCTGAAGCAG GACAATCCCC AGGCGCAGCA GGCCCTGGAT GAACTGGACA GCGCGATCAG CCGGCTGTCG GCACAGGCCA GATTGAGCGC TTGA
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Protein sequence | MLDRLGIRSR VLLLALLPAG LMALVLGSYF TWLQQNDLRT QLLQRGKMIA EQLAPLAAPA MARLAPAQLE RIAAQTLEQA DVRAVAFLAP DRTRLAHAGP SMLNLPPSGG TGTQLLQRSG NDATRYLMPV FGHHRDLATD AVPAEAERLL GWVEIELSHD GTLLRGYRNL FTSLLLILAC LALSGLLALR MSRTINDPIE RIKHAVNQLK DGHLEERLPT MGSHELDELA HGINRMAETL QNAHEELQHS IDQATEDVRQ NLETIEIQNI ELDMARKEAL EASRIKSEFL ANMSHEIRTP LNGILGFTHL LQKSEMTPRQ LDYLNTIEKS ADNLLGIINE ILDFSKIEAG KLVLDSIPFN LRDLIQDTLT ILAPAAHAKQ LELLSLIYRD TPASLVGDPL RLKQILTNLV SNAIKFTREG TIVVRAMLED EHEDCAQLRI SVQDTGIGLS PQDVRTLFQA FSQADNSLAR QPGGTGLGLV ISKRLIEQMG DEIGVDSTPG EGSQFWISLN LPKAHDDAEA LPPQPLLGRR AAIVDGHELA RQALEHQLED CGLSVSLFAS YDQLLQGVQA ASQAGLPFEF AVLGANLGNL SPEQLGHYHQ QLERYHCQCV VLCPTTEQAL YHPYLPNGHG QLLSKPTCTR KLRRLLLELV QPRRPLAEMS NANGQRRPKI LCVDDNAANL LLVKTLLEDL GAEVLAVNNG YAAVQAVQEE LFDLVLMDVQ MPGMDGRACT EQIRLWENTQ SGNPLPIVAL TAHAMANEKR ALLHSGMDDY LTKPISERQL AQVVMKWTGL SLGTPQQAQP ELLTNGDELK VLDPEEGLRL AAGKADLAAD MLSMLLASLD TDREAIRAAR EADDRNGLIE QVHRLNGASR YCGVPQLRAA CQRSETLLKQ DNPQAQQALD ELDSAISRLS AQARLSA
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