| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4048 |
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| Symbol | |
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| ID | 5191530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4564017 |
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| End bp | 4564550 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640588525 |
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| Product | NLP/P60 protein |
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| Protein accession | YP_001269356 |
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| Protein GI | 148549254 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAAAGA TGGCGCGCTT CGCATTTTTC TCCTTGGCAG CCTTGCTGGC TGCATGCTCC
AGCCGTGCGC CTGCGCCGGC CCCTGTGGTA CAGCCGCAGG TGACCTATAG CCAGCCCAGT
CCTTCACCGA TTGCCGATGA CGTGCTGATC CGCGCCATTG GTCTGGTTGG CACGCCCTAT
CGTTGGGGCG GCAATACGCC GGACTCCGGC TTCGACTGCA GCGGCCTGAT CAAGTATGTG
TACCGTGATG CTGCTGGCAT CAGCCTGCCG CGCTCGACGC GCGAGATGAT TGTCATGCGC
GCACCGACGG TGGATGTCAG TTCGCTGCAG TCTGGTGACC TGGTGTTCTT CGCCACCAGT
GGGGGCTCGC AGGTCAGCCA TGCCGGCATC TATGTCGGGG ACGGGCGCTT CGTGCATGCA
CCTTCCACCG GTGGCACCGT GCGCCTGGAC TACCTGTCGA ACAGCTACTG GGCCAAGGCC
TACCTGCAGG CCAAGCGGGT GATTCCGCAA GGGCATCTGG CACAGAACCC TTGA
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| Protein sequence | MVKMARFAFF SLAALLAACS SRAPAPAPVV QPQVTYSQPS PSPIADDVLI RAIGLVGTPY
RWGGNTPDSG FDCSGLIKYV YRDAAGISLP RSTREMIVMR APTVDVSSLQ SGDLVFFATS
GGSQVSHAGI YVGDGRFVHA PSTGGTVRLD YLSNSYWAKA YLQAKRVIPQ GHLAQNP
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