Gene Pput_4047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4047 
Symbol 
ID5191529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4562943 
End bp4563554 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content63% 
IMG OID640588524 
Productcob(I)yrinic acid a,c-diamide adenosyltransferase 
Protein accessionYP_001269355 
Protein GI148549253 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2109] ATP:corrinoid adenosyltransferase 
TIGRFAM ID[TIGR00708] cob(I)alamin adenosyltransferase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATT CCACCGAACG CGACGAACGC CACCTGGCGC GCATGCAGCG CAAGAAGGCG 
GTCATCGACG AACGCATCGC CAATTCCCCT AACGAATGCG GCCTGCTGCT GGTGCTGACC
GGCAATGGCA AGGGCAAGAG CAGTTCGGCC TTCGGCATGC TCGCGCGAGC CTTGGGCCAC
GGCATGCAAT GCGGTGTGGT GCAGTTCATC AAGGGCCGCA ACAGCACCGG CGAGGAGCTG
TTCTTCCGCC GCTTCCCCGA ACAGGTGCGC TACCACGTGA TGGGCGAGGG CTTTACCTGG
GAAACCCAGG ACCGCCAGCG TGACATCGCC GCTGCGCAAG CCGCCTGGGC GGTGTCGCGC
CAGTTGCTGC AGGACCCAGG TGTACAGTTC GTGGTGCTGG ACGAGCTCAA CATCGCCCTC
AAACATGGCT ACCTCGACCT GGACCAGGTA CTGTCCGACA TTCAGGCCCG CCCGCCCATG
CAGCATGTGA TTGTCACTGG CCGCGCTGCG AAGCCTGAGA TGATCGAACT GGCCGACACC
GTGACCGAAA TGGGCATGCT CAAGCACGCC TTCCAGGCCG GTATCCGCGC ACAGAAGGGC
GTCGAACTGT GA
 
Protein sequence
MSDSTERDER HLARMQRKKA VIDERIANSP NECGLLLVLT GNGKGKSSSA FGMLARALGH 
GMQCGVVQFI KGRNSTGEEL FFRRFPEQVR YHVMGEGFTW ETQDRQRDIA AAQAAWAVSR
QLLQDPGVQF VVLDELNIAL KHGYLDLDQV LSDIQARPPM QHVIVTGRAA KPEMIELADT
VTEMGMLKHA FQAGIRAQKG VEL