Gene Pput_4045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4045 
Symbol 
ID5191596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4561004 
End bp4561654 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content67% 
IMG OID640588522 
Productcob(II)yrinic acid a,c-diamide reductase 
Protein accessionYP_001269353 
Protein GI148549251 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID[TIGR02476] cob(II)yrinic acid a,c-diamide reductase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGATC ACGCCTATAG CGACGCCGAG CGCGCCGCCA TTTACCGGGC CATCGGCGAG 
CGCCGCGACA TGCGCCATTT TGCGGGTGGC CAGGTGGCGC CCGAACTGCT TGGCCGCTTG
CTGGCCGCCG CGCATCAGGC GCCCAGTGTC GGGCTTATGC AGCCGTGGCG CTTTATCCGC
ATCACCCAGC GTGACCTGCG CGGGCGCATC CAGGCCCTGG TGGAGGCGGA GCGGGTACGC
ACGGCCGAGG CGTTGGGCGA GCGATCCGAT GCCTTCATGA AATTGAAGGT GGAGGGCATA
AACGATTGTG CCGAGCTGCT GGTGGCGGCC TTGATGGACA ACCGCGAGCC TCACATCTTC
GGCCGCCGCA CCCTGCCGGA GATGGACCTG GCCTCGCTGG CCTGTGCCAT CCAGAACCTG
TGGCTGGCCG CGCGTGGCGA AGGGCTGGGC ATGGGCTGGG TGTCGCTGTT CGACCCGCAG
GCGTTGGCCG CGCTGCTGGG CATGCCCGCC GGGGCCAAGC CGGTGGCGGT ACTGTGCCTT
GGGCCGGTCG CCGCGTTCTA TCCGGTGCCG ATGTTGGTGC AGGAAAGCTG GGCCGAAGAG
CGGCCCCTGA GTGAAATGCT TTACGAAAAC CAATGGGGAG AGCGTCAATG A
 
Protein sequence
MNDHAYSDAE RAAIYRAIGE RRDMRHFAGG QVAPELLGRL LAAAHQAPSV GLMQPWRFIR 
ITQRDLRGRI QALVEAERVR TAEALGERSD AFMKLKVEGI NDCAELLVAA LMDNREPHIF
GRRTLPEMDL ASLACAIQNL WLAARGEGLG MGWVSLFDPQ ALAALLGMPA GAKPVAVLCL
GPVAAFYPVP MLVQESWAEE RPLSEMLYEN QWGERQ