| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4044 |
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| Symbol | cobD |
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| ID | 5190360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4560099 |
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| End bp | 4561007 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640588521 |
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| Product | cobalamin biosynthesis protein |
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| Protein accession | YP_001269352 |
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| Protein GI | 148549250 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGTGG CCTTGCTGAC CGTGGCCGGG GTGGCCCTGG ACGCTTTGCT GGGCGAACCA
CAGCGGCGCC ACCCCTTGGT GGCGTTCGGC AACATGGCCG GCACCCTGGA GCGCCGCCTG
AATGCGGGCG GGCGCGGCTG GCGCAGCCAC GGCGTGAGCG CGTGGTTTCT GGCGGTGGTG
CCGCTGACCC TGGTGGCGCT GCTCCTTTCG TGGCTGCCGT ATATTGGCTG GCTGGTTGAC
GTGCTGGCGC TTTACTGCGC CGTGGGGCTG CGCAGCCTGG GCGAGCATGT GCTGCCGGTG
GCCAACGCCT TGCGCCAGGG CGACCTGGCG GAGGCGCGGC ACCGCGTTGG CTACCTGGTC
AGCCGCGAAA CGCGCGAACT GGACGAGCCA GCAGTGGCCC GAGCGGCGAC CGAGTCGGTG
CTGGAGAACG GCAGCGATGC AGTGTTCGCC GCGTTGTTCT GGTTTGTGGT GGCCGGTGCG
CCCGGGGTGG TGCTGTACCG CCTGAGCAAC ACGCTGGATG CCATGTGGGG CTACCGTAAC
GAACGTTTCG AGCGCTTTGG CTGGTGCGCG GCGCGCATCG ACGATGTGCT CAACTACATA
CCTGCAAGGC TGGTAGCCCT GACTTATGCG CTGTTGGGCA AGACCCGTCT GGCCCTGGCC
TGCTGGCGCA AACAGGGCCC GCTGTGGGAC AGCCCCAACG CCGGGCCGGT GATGGCTGCC
GGCGCCGGCG CGCTGGGCGT CGAGCTTGGT GGCCCGGCGG TGTACCACGG CGAACTGCAT
GAGCGGCCGC GTCTGGGCGA GGGGCCAGTG GCCGATGCCG ATGCCATCGA GCGCGGCTGG
CAGCTGGTGC AGCGCGGCGT GTGGCTGTGG CTGCTGATGA TTTGCCTGGG GGCCTATATC
AATGCTTGA
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| Protein sequence | MSVALLTVAG VALDALLGEP QRRHPLVAFG NMAGTLERRL NAGGRGWRSH GVSAWFLAVV
PLTLVALLLS WLPYIGWLVD VLALYCAVGL RSLGEHVLPV ANALRQGDLA EARHRVGYLV
SRETRELDEP AVARAATESV LENGSDAVFA ALFWFVVAGA PGVVLYRLSN TLDAMWGYRN
ERFERFGWCA ARIDDVLNYI PARLVALTYA LLGKTRLALA CWRKQGPLWD SPNAGPVMAA
GAGALGVELG GPAVYHGELH ERPRLGEGPV ADADAIERGW QLVQRGVWLW LLMICLGAYI
NA
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