Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4040 |
Symbol | cobT |
ID | 5192431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4556088 |
End bp | 4557143 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640588517 |
Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
Protein accession | YP_001269348 |
Protein GI | 148549246 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAAG CCTGGTGGCG TGACGCCTGC CAACCCCTCG ACAACGCCGC CATGGACCAG GCCCGCGCCC GTCAGCAGCA ACTGACCAAA CCTGCAGGCT CGCTCGGCCA ACTTGAAGCG CTGGCGATTC AGCTGGCTGG CCTTCAGGGG CTTGAACGAC CCACGCTGGA TCAGGTTGCC ATTACCATTT TTGCCGGCGA CCACGGCGTG GTCGAAGAGG GCATCTCGGC CTATCCGCAG GCGGTAACCG GGCAGATGCT ATGTAACTTC GTCGGCGGGG GCGCGGCGAT CAGTGTGCTG GCGCGGCAGC TGCAGGCCAG CCTGGACGTG GTCGACCTGG GCACCATTGA CGCGCAGCTG GAACTGCCCG GCGTGCGCCA TCTGCGCCTG GGCACCGGTA CTGCCAACTT TGCCCGTCAA CCCGCGATGA CCGAAAACCA GCTGCAAGCG GCCTTGCAGG CCGGTCGCGA CAGTGCCCAG CGCGGCGCCG AACAGGGCGC ACAGCTGTTC ATCGGTGGCG AGATGGGCAT TGGTAACACC ACAGCCGCCG CAGCCTTGGC CAGTGTTCTG CTGGGGTGTC CGGCGTCGGA GCTGAGCGGC CCTGGCACCG GTCTGGACAA CGCCGGGGTA CAGCACAAGG CTGAAGTCAT CGAGAGGGCG CTGCGCCTGC ATGGCCTGCG TGCTGAAGAC CCGTTGCAGG TACTGGGCTG TGTTGGCGGT TTCGAGATCG CGGCGTTGGT CGGTGCCTAC ATAGGTTGTG CGCAGGCGGG TGTCGCGGTG CTGGTGGATG GCTTTATCTG CAGTGTCGCT GCGCTCGTGG CAGTGCGCCT CAACCCGCAG TGTCGGGCCT GGCTGTTGTT CGCTCATCAG GGCGCTGAAC CCGGGCACAA GACCTTGCTT GCTGCACTGC AGGCCGAGCC CCTGCTGGCC TTGGGCTTGC GCCTGGGTGA GGGCAGTGGC GCTGCCTTGG CGGTGCCGCT GTTGCGCCTG GCCTGTGCGC TGCATGGGCA GATGGCGACC TTTGCCGAGG CCGCGGTGGC GGACCGCCCG GCATGA
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Protein sequence | MTQAWWRDAC QPLDNAAMDQ ARARQQQLTK PAGSLGQLEA LAIQLAGLQG LERPTLDQVA ITIFAGDHGV VEEGISAYPQ AVTGQMLCNF VGGGAAISVL ARQLQASLDV VDLGTIDAQL ELPGVRHLRL GTGTANFARQ PAMTENQLQA ALQAGRDSAQ RGAEQGAQLF IGGEMGIGNT TAAAALASVL LGCPASELSG PGTGLDNAGV QHKAEVIERA LRLHGLRAED PLQVLGCVGG FEIAALVGAY IGCAQAGVAV LVDGFICSVA ALVAVRLNPQ CRAWLLFAHQ GAEPGHKTLL AALQAEPLLA LGLRLGEGSG AALAVPLLRL ACALHGQMAT FAEAAVADRP A
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