Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4033 |
Symbol | |
ID | 5193144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4551010 |
End bp | 4551561 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640588510 |
Product | glutathione peroxidase |
Protein accession | YP_001269341 |
Protein GI | 148549239 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0386] Glutathione peroxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.475849 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGCAC ATTGGTTGAC GGTGCCGGTG CTGGCCCTGC TTGCCAGTAC ATCGAGCTGG GCTGCAGATT GCCCGACGTT GTTGCAGGGC AGCCTGCCGG AATTGCGCGG TAAGGGGCAG GTCGACCTCT GCGAGCGCTT TGCCGGCAAG CCGCTCGTGG TGGTGAATAC TGCCAGTTAT TGCGGTTTTG CCCCGCAGTT CGAGGGGCTT GAGGCGACGT ACAAGGAATA TCACGAGCAA GGCCTGGAAA TGCTCGGCGT GCCGTCCAAT GACTTCAAGC AGGAAGACGC CGACAGTGAG AAGACTGCCA AGGTTTGCTA TGCCAACTAC GGTGTCACCT TCACCATGAC CAAGACGCAG GCGGTGCGGG GCAAGGATGC GATACCGCTG TTTGCGGAGC TGGCCAGCCA GAGCAGTGCG CCGAAGTGGA ATTTCTACAA GTATGTTGTC GATCGCAAGG GCAAGGTGAT CGGTAACTTC TCCAGCCTGA CCAAACCGGA TGATCCTGCG TTCCGCGCCG CTATCGAAAA GGCCATCGCC TCACAGCAGT AA
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Protein sequence | MRAHWLTVPV LALLASTSSW AADCPTLLQG SLPELRGKGQ VDLCERFAGK PLVVVNTASY CGFAPQFEGL EATYKEYHEQ GLEMLGVPSN DFKQEDADSE KTAKVCYANY GVTFTMTKTQ AVRGKDAIPL FAELASQSSA PKWNFYKYVV DRKGKVIGNF SSLTKPDDPA FRAAIEKAIA SQQ
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